RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 BPIFB6Q8NFQ5 453 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 TRUB1Q8WWH5 349 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 FOXN4Q96NZ1 517 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 BBC3Q96PG8 261 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 KCNK17Q96T54 332 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 OR51V1Q9H2C8 321 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 RERGLQ9H628 205 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 RNF122Q9H9V4 155 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 ASB6Q9NWX5 421 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 TINAGQ9UJW2 476 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 ALPK2Q86TB3 2170 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 IGKV3D-15A0A087WSY6 115 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC22A23A1A5C7 686 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PRSS37A4D1T9 235 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 AHRRA9YTQ3 701 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PRR23D1E9PI22 279 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 XKRYO14609 159 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC19A2O60779 497 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF432O94892 652 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 APOL3O95236 402 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 GPANK1O95872 356 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PGA4P0DJD7 388 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PGA3P0DJD8 388 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PRR23D2P0DMB1 279 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PYCR1P32322 319 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 ETFDHQ16134 617 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 TMEM201Q5SNT2 666 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 NCCRP1Q6ZVX7 275 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 NUFIP2Q7Z417 695 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 P4HA3Q7Z4N8 544 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 DOLPP1Q86YN1 238 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 OR6V1Q8N148 313 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 OR6X1Q8NH79 312 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 MRPL13Q9BYD1 178 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 NMNAT2Q9BZQ4 307 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 FAM192AQ9GZU8 254 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 NUAK2Q9H093 628 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 CLN6Q9NWW5 311 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 KLHL9Q9P2J3 617 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SH3BGRL2Q9UJC5 107 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 CCDC182A6NF36 153 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC1A7O00341 560 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 ATXN7O15265 892 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 EDN3P14138 238 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 CTLA4P16410 223 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC2A5P22732 501 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PIGFQ07326 219 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 APOFQ13790 326 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 OCLNQ16625 522 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 AAED1Q7RTV5 226 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 ADCK1Q86TW2 530 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 KISS1RQ969F8 398 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC25A44Q96H78 314 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 BCO1Q9HAY6 547 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 PAK1IP1Q9NWT1 392 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 VSX1Q9NZR4 365 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF835Q9Y2P0 537 aa13.88□□□□□ -0.19
SFSWAP-206ENST00000537582 A6NIZ1 184 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF726A6NNF4 738 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 MPZL2O60487 215 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 TOXO94900 526 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 RENP00797 406 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 IGHV3-9P01782 118 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 ADRA2AP08913 450 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 SPI1P17947 270 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 AGTR1P30556 359 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 CLRN1P58418 232 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 RAP1BP61224 184 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 RAP1AP62834 184 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 SIRPAP78324 504 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF91Q05481 1191 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 FOXF2Q12947 444 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 RNPS1Q15287 305 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 C1orf185Q5T7R7 199 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 NSUN5P2Q63ZY6 315 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 SHFQ7M4L6 423 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 MCEMP1Q8IX19 187 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 HTRA1Q92743 480 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 ZNF566Q969W8 418 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 NOSIPQ9Y314 301 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 SMG1Q96Q15 3661 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 ZFYVE26Q68DK2 2539 aa13.87□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC16A7O60669 478 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 FAM20BO75063 409 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 WDR1O75083 606 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 UPK3AO75631 287 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 IGHG1P01857 330 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 YES1P07947 543 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 FCGR2AP12318 317 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 PAICSP22234 425 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 CHN2P52757 468 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 CDH11P55287 796 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 SLC25A30Q5SVS4 291 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 NXNL2Q5VZ03 156 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 FAM205BPQ63HN1 556 aa13.86□□□□□ -0.19
SFSWAP-206ENST00000537582 LINGO2Q7L985 606 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms