RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HMGN1P05114 100 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 CDKN2AP42771 156 aaKnown RBP21.45■■□□□ 1.02
HMGA2-208ENST00000537429 OR3A2P47893 321 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 MTFR2Q6P444 385 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 PTCHD4Q6ZW05 846 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.45■■□□□ 1.02
HMGA2-208ENST00000537429 ADCK1Q86TW2 530 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 DHRSXQ8N5I4 330 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 OR52E2Q8NGJ4 325 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 OR4K13Q8NH42 304 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 APH1AQ96BI3 265 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 LRR1Q96L50 414 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 PITX2Q99697 317 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 TEX12Q9BXU0 123 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 FOXD3Q9UJU5 478 aaPredicted RBP21.45■■□□□ 1.02
HMGA2-208ENST00000537429 SLC43A1O75387 559 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 SLC2A10O95528 541 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 IGHG1P01857 330 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 OPRM1P35372 400 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 ADARB1P78563 741 aaKnown RBP21.45■■□□□ 1.02
HMGA2-208ENST00000537429 ADORA2A-AS1P86434 159 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 CARD17Q5XLA6 110 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 CCDC71Q8IV32 467 aaPredicted RBP21.45■■□□□ 1.02
HMGA2-208ENST00000537429 ZNF555Q8NEP9 628 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 CCDC120Q96HB5 630 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 ADI1Q9BV57 179 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 TVP23BQ9NYZ1 205 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 RNF6Q9Y252 685 aa21.45■■□□□ 1.02
HMGA2-208ENST00000537429 INTS1Q8N201 2190 aaKnown RBP21.44■■□□□ 1.02
HMGA2-208ENST00000537429 PRSS37A4D1T9 235 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 GGT2P36268 569 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 EFNB1P98172 346 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.44■■□□□ 1.02
HMGA2-208ENST00000537429 KEAP1Q14145 624 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 HIST3H3Q16695 136 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 TSPO2Q5TGU0 170 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 TTC23Q5W5X9 447 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 TFAP2EQ6VUC0 442 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 C20orf196Q8IYI0 205 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 ZNF100Q8IYN0 542 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 SYT14Q8NB59 555 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 NPEPL1Q8NDH3 523 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 SDR9C7Q8NEX9 313 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 NOXO1Q8NFA2 376 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 TMEM54Q969K7 222 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 SLC38A2Q96QD8 506 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 SNX18Q96RF0 628 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 NMNAT3Q96T66 252 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 DDOQ99489 341 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 ALG12Q9BV10 488 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 PRRG3Q9BZD7 231 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 SLCO5A1Q9H2Y9 848 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 COQ3Q9NZJ6 369 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 KLHL21Q9UJP4 597 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 SLC5A6Q9Y289 635 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 GMPPBQ9Y5P6 360 aa21.44■■□□□ 1.02
HMGA2-208ENST00000537429 OR6C65A6NJZ3 312 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 H0YAE9 185 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 AHCYL1O43865 530 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 CD8BP10966 210 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 BMP5P22003 454 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 SNAPC1Q16533 368 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 JAZF1Q86VZ6 243 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 LIX1LQ8IVB5 337 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 CYGBQ8WWM9 190 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 LINC00470Q9BZP3 86 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 SLC7A10Q9NS82 523 aa21.43■■□□□ 1.02
HMGA2-208ENST00000537429 VSX1Q9NZR4 365 aaPredicted RBP21.43■■□□□ 1.02
HMGA2-208ENST00000537429 ERRFI1Q9UJM3 462 aaPredicted RBP21.43■■□□□ 1.02
HMGA2-208ENST00000537429 SLC22A23A1A5C7 686 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 H7C1C5 153 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 UPK3AO75631 287 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 SMNDC1O75940 238 aaKnown RBP eCLIP21.42■■□□□ 1.02
HMGA2-208ENST00000537429 IFNGP01579 166 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 CAPGP40121 348 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 CSNK1A1P48729 337 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 CLRN1P58418 232 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 LCN6P62502 163 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 LGALS3BPQ08380 585 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 PHYHD1Q5SRE7 291 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 LEG1Q6P5S2 330 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 SLC37A3Q8NCC5 494 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 OR6N1Q8NGY5 312 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 TFAP2CQ92754 450 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 NMD3Q96D46 503 aaKnown RBP21.42■■□□□ 1.02
HMGA2-208ENST00000537429 GLTPQ9NZD2 209 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 PRSS50Q9UI38 385 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 PROCRQ9UNN8 238 aa21.42■■□□□ 1.02
HMGA2-208ENST00000537429 OR6C68A6NDL8 312 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 RIIAD1A6NNX1 92 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 DVL2O14641 736 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 IGHV3-9P01782 118 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 PLA2G2AP14555 144 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 ZNF3P17036 446 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 PCYT1AP49585 367 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 CDC42P60953 191 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 CRMP1Q14194 572 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 POMGNT2Q8NAT1 580 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 FAM81AQ8TBF8 368 aa21.41■■□□□ 1.02
HMGA2-208ENST00000537429 FNDC8Q8TC99 324 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms