RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TPM4P67936 248 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 CD83Q01151 205 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 ACSM2AQ08AH3 577 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 FRG1Q14331 258 aaKnown RBP7.72□□□□□ -1.17
CPSF7-217ENST00000537162 MFSD13AQ14CX5 517 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 MAPK14Q16539 360 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 MOGQ16653 247 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 FAM201AQ5SY85 155 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 THEM4Q5T1C6 240 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 ACSM2BQ68CK6 577 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 SKA3Q8IX90 412 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 CENPLQ8N0S6 344 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-217ENST00000537162 TMEM123Q8N131 208 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 PNKDQ8N490 385 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 PTGR2Q8N8N7 351 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-217ENST00000537162 FAM71CQ8NEG0 241 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 OR8B3Q8NGG8 313 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 ISOC1Q96CN7 298 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 OR2M2Q96R28 347 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 OR8B2Q96RD0 313 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 STACQ99469 402 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 MYLK2Q9H1R3 596 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 RANBP3Q9H6Z4 567 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-217ENST00000537162 NMRK1Q9NWW6 199 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
CPSF7-217ENST00000537162 CLN8Q9UBY8 286 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 HIF3AQ9Y2N7 669 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 GPR45Q9Y5Y3 372 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 TEX264Q9Y6I9 313 aa7.72□□□□□ -1.17
CPSF7-217ENST00000537162 PLSCR5A0PG75 271 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 SYCE1LA8MT33 242 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 FCMRO60667 390 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 SCN2BO60939 215 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 UGT2B17O75795 530 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 OR4F21O95013 312 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CYB5R3P00387 301 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 GPIP06744 558 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 FKBP2P26885 142 aaKnown RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 TACR3P29371 465 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CDH13P55290 713 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 ARF6P62330 175 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CAMK2DQ13557 499 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 FASTKD3Q14CZ7 662 aaKnown RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 GPR68Q15743 365 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 ZNF141Q15928 474 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CARD17Q5XLA6 110 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 ZCCHC12Q6PEW1 402 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CCDC121Q6ZUS5 278 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 ZNF627Q7L945 461 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 OVCH2Q7RTZ1 564 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 HMGN2P46Q86SG4 172 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 OR5R1Q8NH85 324 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 ITLN1Q8WWA0 313 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 LINC00476Q8WZB0 136 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 NSMAFQ92636 917 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 PHF21BQ96EK2 531 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 FAM120BQ96EK7 910 aaKnown RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 MAELQ96JY0 434 aaKnown RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 EGLN2Q96KS0 407 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 NKX3-1Q99801 234 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 TRIM5Q9C035 493 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CDH20Q9HBT6 801 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 TCF7L2Q9NQB0 619 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 SNX6Q9UNH7 406 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 PPP1R3CQ9UQK1 317 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 MAB21L2Q9Y586 359 aa7.71□□□□□ -1.18
CPSF7-217ENST00000537162 TNPO3Q9Y5L0 923 aaKnown RBP7.71□□□□□ -1.18
CPSF7-217ENST00000537162 CLDN24A6NM45 220 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 PDPK1O15530 556 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 PTMSP20962 102 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 PAX6P26367 422 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 CRHR1P34998 444 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 BNIP2Q12982 314 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 CHI3L2Q15782 390 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 SPIN4Q56A73 249 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 METTL11BQ5VVY1 283 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 ETV3LQ6ZN32 361 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 Q6ZR03 302 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 Q6ZS46 218 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 MRPL41Q8IXM3 137 aaKnown RBP7.7□□□□□ -1.18
CPSF7-217ENST00000537162 RPP25LQ8N5L8 163 aaKnown RBP7.7□□□□□ -1.18
CPSF7-217ENST00000537162 C8orf46Q8TAG6 207 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 RHEBL1Q8TAI7 183 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 ZNF420Q8TAQ5 688 aaPredicted RBP7.7□□□□□ -1.18
CPSF7-217ENST00000537162 C17orf50Q8WW18 174 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 RORBQ92753 470 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 PMM1Q92871 262 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 SAMD8Q96LT4 415 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 C3orf30Q96M34 536 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 SDF2Q99470 211 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 DCTN5Q9BTE1 182 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 ACTRT3Q9BYD9 372 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 RNF121Q9H920 327 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 B3GAT1Q9P2W7 334 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 MKLN1Q9UL63 735 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 ZDHHC8Q9ULC8 765 aa7.7□□□□□ -1.18
CPSF7-217ENST00000537162 PHYHO14832 338 aa7.69□□□□□ -1.18
CPSF7-217ENST00000537162 FCN3O75636 299 aa7.69□□□□□ -1.18
CPSF7-217ENST00000537162 UBL3O95164 117 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms