RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 ZNF74Q16587 644 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 SLC22A10Q63ZE4 541 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 DPY19L2P2Q6ZN68 376 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 MFSD4AQ8N468 514 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 ACBD7Q8N6N7 88 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 C10orf53Q8N6V4 93 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 TMEM99Q8N816 258 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 OR52E2Q8NGJ4 325 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 OR4K13Q8NH42 304 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 OR52N1Q8NH53 320 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 PAQR8Q8TEZ7 354 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 UFD1Q92890 307 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 CCDC120Q96HB5 630 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 MOGAT1Q96PD6 335 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 C6orf62Q9GZU0 229 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-208ENST00000537004 NXF2Q9GZY0 626 aaKnown RBP10.72□□□□□ -0.69
CLIP1-208ENST00000537004 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 INIPQ9NRY2 104 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 ADAM18Q9Y3Q7 739 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 HRH3Q9Y5N1 445 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 NPFFR2Q9Y5X5 522 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 LIPGQ9Y5X9 500 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 CSMD2Q7Z408 3487 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 DNAJC13O75165 2243 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 ZNF670-ZNF695F2Z2N8 137 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 LALBAP00709 142 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 GYPBP06028 91 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 GP1BBP13224 206 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 SOX6P35712 828 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 PRPS1P60891 318 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 RBPJQ06330 500 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 TOMM34Q15785 309 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-208ENST00000537004 NTRK2Q16620 822 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 BTLAQ7Z6A9 289 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 TMEM251Q8N6I4 163 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 ZFP41Q8N8Y5 198 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 SDR9C7Q8NEX9 313 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 OR5W2Q8NH69 310 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 LIPHQ8WWY8 451 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 TMEM203Q969S6 136 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 RELTQ969Z4 430 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 JSRP1Q96MG2 331 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-208ENST00000537004 FAM173AQ9BQD7 235 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 ASPNQ9BXN1 380 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 NRIP3Q9NQ35 241 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 NANSQ9NR45 359 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 KLHL21Q9UJP4 597 aa10.72□□□□□ -0.69
CLIP1-208ENST00000537004 A0A1B0GUH1 482 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 AKAP8O43823 692 aaKnown RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 GLSO94925 669 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 ABOP16442 354 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 PGCP20142 388 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 RPS25P62851 125 aaKnown RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 ACSM1Q08AH1 577 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 GTF3C1Q12789 2109 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 DOLPP1Q86YN1 238 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 MOSPD2Q8NHP6 518 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 SPRYD4Q8WW59 207 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 KTI12Q96EK9 354 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 GPX7Q96SL4 187 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 TBX5Q99593 518 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 KATNB1Q9BVA0 655 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 TXNL4BQ9NX01 149 aaKnown RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 HIF3AQ9Y2N7 669 aa10.71□□□□□ -0.69
CLIP1-208ENST00000537004 CAB39Q9Y376 341 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 SF3B6Q9Y3B4 125 aaKnown RBP10.71□□□□□ -0.69
CLIP1-208ENST00000537004 DAPL1A0PJW8 107 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 LRRC3CA6NJW4 275 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 BLOC1S5-TXNDC5H3BN57 136 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ARPC3O15145 178 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 MRPL3P09001 348 aaKnown RBP10.7□□□□□ -0.7
CLIP1-208ENST00000537004 SBK2P0C263 348 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 CXCR1P25024 350 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 GABRA5P31644 462 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 RPS19P39019 145 aaKnown RBP10.7□□□□□ -0.7
CLIP1-208ENST00000537004 P2RX1P51575 399 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ERVK-25P63136 954 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 CBFBQ13951 182 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 EFR3AQ14156 821 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 TMPRSS11AQ6ZMR5 421 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 OR10H4Q8NGA5 316 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ALG8Q9BVK2 526 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 RERGLQ9H628 205 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ZDHHC11Q9H8X9 412 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ISG20L2Q9H9L3 353 aaKnown RBP10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ADGRL4Q9HBW9 690 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 INPP5EQ9NRR6 644 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 HAO2Q9NYQ3 351 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 FBN2P35556 2912 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 C2orf72A6NCS6 295 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 IDH3BO43837 385 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 TPOP07202 933 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 PTGS2P35354 604 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 AQP2P41181 271 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 LTBQ06643 244 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 POU4F2Q12837 409 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms