RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SLC7A13Q8TCU3 470 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 GEMIN6Q8WXD5 167 aaKnown RBP3.71□□□□□ -1.82
PRKDC-208ENST00000536710 MYDGFQ969H8 173 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ELSPBP1Q96BH3 223 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 PANX1Q96RD7 426 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 SLC29A1Q99808 456 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 ECSITQ9BQ95 431 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 C20orf24Q9BUV8 137 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 TMEM185BQ9H7F4 350 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 DEC1Q9P2X7 70 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 GNPTGQ9UJJ9 305 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 CHD4Q14839 1912 aa3.71□□□□□ -1.82
PRKDC-208ENST00000536710 KRTAP4-16G5E9R7 235 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 H3BNH8 94 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 DNALI1O14645 258 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 SLC31A2O15432 143 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 EIF3GO75821 320 aaKnown RBP eCLIP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 H6PDO95479 791 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 CALM1P0DP23 149 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 CALM2P0DP24 149 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 CALM3P0DP25 149 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 CNR1P21554 472 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 RRM2P31350 389 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 NAA10P41227 235 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 TMED10P49755 219 aaKnown RBP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 C21orf59P57076 290 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 IRX3P78415 501 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF92Q03936 586 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 AQP6Q13520 282 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 KRT71Q3SY84 523 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 C9orf135Q5VTT2 229 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 ANKRD26P1Q6NSI1 321 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 PDIK1LQ8N165 341 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 RNF175Q8N4F7 328 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 OR10G9Q8NGN4 311 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 OR2G3Q8NGZ4 309 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 DTX3LQ8TDB6 740 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 NRTNQ99748 197 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 FGF20Q9NP95 211 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-208ENST00000536710 TMED5Q9Y3A6 229 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 CNTNAP1P78357 1384 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 USP47Q96K76 1375 aa3.7□□□□□ -1.82
PRKDC-208ENST00000536710 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 CIB4A0PJX0 185 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 A6NDX4 124 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 A8MU10 97 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 F6UB75 175 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 H0Y9J4 135 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 CDC7O00311 574 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF861PO60384 105 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 KLHL41O60662 606 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 DNAJB6O75190 326 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 EEDO75530 441 aaKnown RBP3.69□□□□□ -1.82
PRKDC-208ENST00000536710 TSPAN13O95857 204 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 DNAH10OSP0CZ25 163 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 ZNF17P17021 662 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 GALP22466 123 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 NSG1P42857 185 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 ATP5OP48047 213 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 RFX3P48380 749 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 NOVP48745 357 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 RPS15P62841 145 aaKnown RBP3.69□□□□□ -1.82
PRKDC-208ENST00000536710 GBE1Q04446 702 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 C2orf83Q53S99 150 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 PPM1LQ5SGD2 360 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 FRMPD2BQ6IN97 320 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 EIF3MQ7L2H7 374 aaKnown RBP3.69□□□□□ -1.82
PRKDC-208ENST00000536710 LUZP2Q86TE4 346 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 TMEM135Q86UB9 458 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 Q8N9W7 124 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 HSD17B11Q8NBQ5 300 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 OR5B3Q8NH48 314 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 MCOLN3Q8TDD5 553 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 ACMSDQ8TDX5 336 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 TMEM54Q969K7 222 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 SLC35E1Q96K37 410 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 OR2M2Q96R28 347 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 OSBPL10Q9BXB5 764 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 CWH43Q9H720 699 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 SLCO1B3Q9NPD5 702 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 SLC25A37Q9NYZ2 338 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 GCNT4Q9P109 453 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 PCYOX1Q9UHG3 505 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 KIAA1257Q9ULG3 409 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 TRAPPC4Q9Y296 219 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 CACNG2Q9Y698 323 aa3.69□□□□□ -1.82
PRKDC-208ENST00000536710 AGRNO00468 2067 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 EIF3HO15372 352 aaKnown RBP eCLIP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 PNMA6AP0CW24 399 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 CRISP2P16562 243 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 CCNE1P24864 410 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 AK4P27144 223 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 CDKN1BP46527 198 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 CCR8P51685 355 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 FGF8P55075 233 aaPredicted RBP3.68□□□□□ -1.82
PRKDC-208ENST00000536710 SMARCB1Q12824 385 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 MERTKQ12866 999 aa3.68□□□□□ -1.82
PRKDC-208ENST00000536710 PSG5Q15238 335 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms