RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 RIPK1Q13546 671 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 HIST3H3Q16695 136 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 C9orf135Q5VTT2 229 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 KLHL24Q6TFL4 600 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 CBLL1Q75N03 491 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 NKAIN4Q8IVV8 208 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 DEPDC4Q8N2C3 294 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 GPR137CQ8N3F9 429 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 RNF217Q8TC41 542 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 TMEM239Q8WW34 195 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 LZICQ8WZA0 190 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 FAM168AQ92567 244 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF837Q96EG3 531 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-207ENST00000536483 TXNDC15Q96J42 360 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 KATNB1Q9BVA0 655 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 BEX2Q9BXY8 128 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 DENND2DQ9H6A0 471 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-207ENST00000536483 CRLF2Q9HC73 371 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 B3GNT2Q9NY97 397 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 A4GNTQ9UNA3 340 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 ATP23Q9Y6H3 246 aa10.82□□□□□ -0.68
PRKDC-207ENST00000536483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.682e-11■■■■■ 80.3
PRKDC-207ENST00000536483 NBEAL1Q6ZS30 2694 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 IGHV1-18A0A0C4DH31 117 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 H7C417 338 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 CXCR6O00574 342 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 PRSS23O95084 383 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 ADORA3P0DMS8 318 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 TNFRSF1BP20333 461 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 CBLP22681 906 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 OR1E2P47887 323 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF133P52736 654 aaPredicted RBP10.81□□□□□ -0.68
PRKDC-207ENST00000536483 TAS2R41P59536 307 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 UBE2NP61088 152 aaKnown RBP10.81□□□□□ -0.68
PRKDC-207ENST00000536483 PSME3P61289 254 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 ST3GAL3Q11203 375 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 PHYHD1Q5SRE7 291 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 CYB5R2Q6BCY4 276 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 SLC35D2Q76EJ3 337 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 WDFY1Q8IWB7 410 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 LRRC17Q8N6Y2 441 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 ARIH2OSQ8N7S6 290 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 IL17RDQ8NFM7 739 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 C10orf105Q8TEF2 133 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 TMEM54Q969K7 222 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 PRRC1Q96M27 445 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 SLC38A2Q96QD8 506 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 MRPL13Q9BYD1 178 aaKnown RBP10.81□□□□□ -0.68
PRKDC-207ENST00000536483 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 MED29Q9NX70 200 aa10.81□□□□□ -0.68
PRKDC-207ENST00000536483 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
PRKDC-207ENST00000536483 YLPM1P49750 1951 aaKnown RBP10.81□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 MGRN1O60291 552 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 OR7A10O76100 309 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 LY6HO94772 140 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 IGHV4-31P0DP07 118 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 IFNGR1P15260 489 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF16P17020 682 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 FUT1P19526 365 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 APOBEC3AP31941 199 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 ARR3P36575 388 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 NUDT2P50583 147 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 UGT2B15P54855 530 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 KRTAP24-1Q3LI83 254 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 ANKDD1AQ495B1 522 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 SPATS1Q496A3 300 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 LRRC23Q53EV4 343 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 DEF8Q6ZN54 512 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 ASRGL1Q7L266 308 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 TSEN54Q7Z6J9 526 aaKnown RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 RNF113BQ8IZP6 322 aaKnown RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 OFCC1Q8IZS5 231 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 C10orf53Q8N6V4 93 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 FAM156AQ8NDB6 213 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 TMEM255BQ8WV15 326 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 GEMIN6Q8WXD5 167 aaKnown RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 SLC25A44Q96H78 314 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-207ENST00000536483 ZNF75AQ96N20 296 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 SHARPINQ9H0F6 387 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 ANKRD19PQ9H560 264 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 SPAG4Q9NPE6 437 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 B3GAT2Q9NPZ5 323 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 MAN2C1Q9NTJ4 1040 aa10.8□□□□□ -0.68
PRKDC-207ENST00000536483 HEATR1Q9H583 2144 aaKnown RBP10.79□□□□□ -0.68
PRKDC-207ENST00000536483 ANKRD65E5RJM6 399 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 FFAR1O14842 300 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 PDE5AO76074 875 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 OR6A2O95222 327 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 HIST1H2ABP04908 130 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 IFNW1P05000 195 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 PGA4P0DJD7 388 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 PGA3P0DJD8 388 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 BMP4P12644 408 aa10.79□□□□□ -0.68
PRKDC-207ENST00000536483 CDH2P19022 906 aaPredicted RBP10.79□□□□□ -0.68
PRKDC-207ENST00000536483 USF1P22415 310 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms