RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 TXNDC15Q96J42 360 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 C7orf26Q96N11 449 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 MOGAT1Q96PD6 335 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 OR52B2Q96RD2 323 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 ASPNQ9BXN1 380 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 PARD6BQ9BYG5 372 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 VIPAS39Q9H9C1 493 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 TMEM27Q9HBJ8 222 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 SLCO1B3Q9NPD5 702 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 HIF1ANQ9NWT6 349 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GLTPQ9NZD2 209 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 RPS6KB2Q9UBS0 482 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GPR160Q9UJ42 338 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 GRIP1Q9Y3R0 1128 aa9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 V9GYY5 206 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-206ENST00000535668 C17orf100A8MU93 164 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 M0R3G1 203 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 CHP2O43745 196 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 LYPD3O95274 346 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 OR8G3PP0DMU2 310 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 SAGP10523 405 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 SRP14P37108 136 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 GIPRP48546 466 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 CDH12P55289 794 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 MYBPC1Q00872 1141 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 RUNX1T1Q06455 604 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 GABPB1Q06547 395 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 NPRL3Q12980 569 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 MOGQ16653 247 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 C6orf10Q5SRN2 563 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 CEP85LQ5SZL2 805 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 KRT80Q6KB66 452 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 WDR88Q6ZMY6 472 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 HDXQ7Z353 690 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 WDFY1Q8IWB7 410 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 C10orf111Q8N326 155 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC22A24Q8N4F4 322 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 OR5J2Q8NH18 312 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF519Q8TB69 540 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 LIPHQ8WWY8 451 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 YIPF5Q969M3 257 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 TLCD1Q96CP7 247 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 SLC25A44Q96H78 314 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 MPP4Q96JB8 637 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 JMJD8Q96S16 334 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF607Q96SK3 696 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 MRPL13Q9BYD1 178 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 ULBP2Q9BZM5 246 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 KCNK9Q9NPC2 374 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF275Q9NSD4 429 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 SLCO1C1Q9NYB5 712 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 TAS2R5Q9NYW4 299 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 POFUT2Q9Y2G5 429 aa9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 POLR3KQ9Y2Y1 108 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-206ENST00000535668 ZNF726A6NNF4 738 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 C5orf58C9J3I9 102 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 NCR1O76036 304 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 RAB36O95755 333 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 PNPP00491 289 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 PTHP01270 115 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 IGHV3-13P01766 116 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 ASAH2BP0C7U1 165 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 B4GALT1P15291 398 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 ATP4BP51164 291 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 PMS2P3Q13401 168 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF74Q16587 644 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 GCNT6Q5T4J0 391 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 C1QL2Q7Z5L3 287 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 RANBP3LQ86VV4 465 aaPredicted RBP9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 LSRQ86X29 649 aaPredicted RBP9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 SKA3Q8IX90 412 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 DPP10Q8N608 796 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 HIPK4Q8NE63 616 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 TSPEARQ8WU66 669 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 ARHGDIGQ99819 225 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 CCDC28BQ9BUN5 200 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 EMC6Q9BV81 110 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 RBM4Q9BWF3 364 aaKnown RBP9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 PLA2G12AQ9BZM1 189 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 BCL2L14Q9BZR8 327 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 SMURF2Q9HAU4 748 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 TMEM38BQ9NVV0 291 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 MED29Q9NX70 200 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 VAPAQ9P0L0 249 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 SLAMF8Q9P0V8 285 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 ZNF229Q9UJW7 825 aa9.58□□□□□ -0.88
CLSTN3-206ENST00000535668 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 SH3PXD2BA1X283 911 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 HTR3EA5X5Y0 456 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 LYNX1G3V0Z9 82 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 H3BSA7 217 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 MMP7P09237 267 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 PGA4P0DJD7 388 aa9.57□□□□□ -0.88
CLSTN3-206ENST00000535668 PGA3P0DJD8 388 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms