RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 OR5I1Q13606 314 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 GNMTQ14749 295 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 MICBQ29980 383 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 PARP15Q460N3 678 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 LRRC10Q5BKY1 277 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 ARMC12Q5T9G4 340 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 CTRB2Q6GPI1 263 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 KDM7AQ6ZMT4 941 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 NUDCD3Q8IVD9 361 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 CCDC65Q8IXS2 484 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 PIANPQ8IYJ0 282 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 TTC5Q8N0Z6 440 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 KCNG3Q8TAE7 436 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 DTX3LQ8TDB6 740 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 MCOLN3Q8TDD5 553 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 TM4SF19Q96DZ7 209 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF641Q96N77 438 aaPredicted RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 PANX2Q96RD6 677 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 FMO2Q99518 471 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 MRPL45Q9BRJ2 306 aaKnown RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 PPA2Q9H2U2 334 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 THUMPD1Q9NXG2 353 aaKnown RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 BFARQ9NZS9 450 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 TMCO1Q9UM00 188 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 CSDC2Q9Y534 153 aaKnown RBP2.85□□□□□ -1.95
PRKDC-205ENST00000535375 SLC25A15Q9Y619 301 aa2.85□□□□□ -1.95
PRKDC-205ENST00000535375 CCDC182A6NF36 153 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 SGK1O00141 431 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 OR7A10O76100 309 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 OXSR1O95747 527 aaPredicted RBP2.84□□□□□ -1.95
PRKDC-205ENST00000535375 MCF2P10911 925 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 TDGF1P13385 188 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 HPGDP15428 266 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF43P17038 809 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 FDFT1P37268 417 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 TDGF1P3P51864 188 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 CRISP3P54108 245 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 GBE1Q04446 702 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 MRPL28Q13084 256 aaKnown RBP2.84□□□□□ -1.95
PRKDC-205ENST00000535375 RFX4Q33E94 735 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 SLC26A11Q86WA9 606 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF695Q8IW36 515 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 BBS5Q8N3I7 341 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 CYB561D1Q8N8Q1 229 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 OR4F6Q8NGB9 312 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 OR10G9Q8NGN4 311 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 PLEKHA8Q96JA3 519 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 RIOK1Q9BRS2 568 aaKnown RBP2.84□□□□□ -1.95
PRKDC-205ENST00000535375 NUP58Q9BVL2 599 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 CDC42EP4Q9H3Q1 356 aaKnown RBP2.84□□□□□ -1.95
PRKDC-205ENST00000535375 CLMPQ9H6B4 373 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 VPS37BQ9H9H4 285 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 CCL28Q9NRJ3 127 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 SLC2A8Q9NY64 477 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF226Q9NYT6 803 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 IKZF2Q9UKS7 526 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 KCNIP3Q9Y2W7 256 aa2.84□□□□□ -1.95
PRKDC-205ENST00000535375 HEATR9A2RTY3 570 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 DNALI1O14645 258 aaPredicted RBP2.83□□□□□ -1.96
PRKDC-205ENST00000535375 SS18L1O75177 396 aaPredicted RBP2.83□□□□□ -1.96
PRKDC-205ENST00000535375 FGF1P05230 155 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 PABPC4LP0CB38 370 aaKnown RBP2.83□□□□□ -1.96
PRKDC-205ENST00000535375 CASP14P31944 242 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 GPM6AP51674 278 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 ENPEPQ07075 957 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 LY6EQ16553 131 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 MARCH8Q5T0T0 291 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 GPR157Q5UAW9 335 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 RNASEKQ6P5S7 137 aaKnown RBP2.83□□□□□ -1.96
PRKDC-205ENST00000535375 TMEM107Q6UX40 140 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 HSDL2Q6YN16 418 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 ZNF620Q6ZNG0 422 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 UTS2BQ765I0 119 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 RNF182Q8N6D2 247 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 OR52K2Q8NGK3 314 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 FGF14Q92915 247 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 EXOSC8Q96B26 276 aaKnown RBP2.83□□□□□ -1.96
PRKDC-205ENST00000535375 ITCHQ96J02 903 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 NAP1L5Q96NT1 182 aaPredicted RBP2.83□□□□□ -1.96
PRKDC-205ENST00000535375 LY9Q9HBG7 655 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 ZDHHC4Q9NPG8 344 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 KLHL28Q9NXS3 571 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 HOXC10Q9NYD6 342 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 HEBP2Q9Y5Z4 205 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 MYO10Q9HD67 2058 aa2.83□□□□□ -1.96
PRKDC-205ENST00000535375 IGLV11-55A0A075B6I3 123 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 IGKV1D-17A0A075B6S4 117 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 A0A0G2JLM5 398 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 AGTP01019 485 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 MRPL3P09001 348 aaKnown RBP2.82□□□□□ -1.96
PRKDC-205ENST00000535375 HNRNPH3P31942 346 aaKnown RBP2.82□□□□□ -1.96
PRKDC-205ENST00000535375 FAM83EQ2M2I3 478 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 HSP90AB3PQ58FF7 597 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 XKR7Q5GH72 579 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 TMEM255AQ5JRV8 349 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 LRRC66Q68CR7 880 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 PCP2Q8IVA1 136 aa2.82□□□□□ -1.96
PRKDC-205ENST00000535375 C12orf56Q8IXR9 622 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms