RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RGS8P57771 180 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TAS2R39P59534 338 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ARF3P61204 181 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PPP3R1P63098 170 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MRPS10P82664 201 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ARF1P84077 181 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 EFNB1P98172 346 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TFAMQ00059 246 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 DHODHQ02127 395 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TNFRSF17Q02223 184 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CHRNB3Q05901 458 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SPOCK1Q08629 439 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ARL16Q0P5N6 197 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 VEZF1Q14119 521 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PEA15Q15121 130 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 EFNB3Q15768 340 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TBCEQ15813 527 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 KCTD19Q17RG1 926 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM74A3Q4VXF1 159 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CYBRD1Q53TN4 286 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SAMD4BQ5PRF9 694 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 C6orf141Q5SZD1 244 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM72AQ5TYM5 149 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM72DQ6L9T8 149 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TRNP1Q6NT89 227 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TMEM107Q6UX40 140 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM151BQ6UXP7 276 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 HACD2Q6Y1H2 254 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 GDPGP1Q6ZNW5 385 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ASB18Q6ZVZ8 466 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ADGRA1Q86SQ6 560 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ADIPOR2Q86V24 386 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 VASH2Q86V25 355 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CYP4Z1Q86W10 505 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM72BQ86X60 149 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RNF130Q86XS8 419 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CFAP206Q8IYR0 622 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 DAW1Q8N136 415 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CBR4Q8N4T8 237 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MINDY1Q8N5J2 469 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 METTL27Q8N6F8 245 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RTL3Q8N8U3 475 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FBXO36Q8NEA4 188 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF555Q8NEP9 628 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 OR6J1Q8NGC5 347 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 OR4C6Q8NH72 309 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 THAP6Q8TBB0 222 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ACTL9Q8TC94 416 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CD99L2Q8TCZ2 262 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TFB1MQ8WVM0 346 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 WBP2Q969T9 261 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SLC35C1Q96A29 364 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 NSUN4Q96CB9 384 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MRPS24Q96EL2 167 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MOCOSQ96EN8 888 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SCRN2Q96FV2 425 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 OTUB1Q96FW1 271 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CMTM7Q96FZ5 175 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PDLIM5Q96HC4 596 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PACRGQ96M98 296 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 OR2M2Q96R28 347 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SLC22A12Q96S37 553 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 S100A13Q99584 98 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TSNAXQ99598 290 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 NIPSNAP1Q9BPW8 284 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FEM1AQ9BSK4 669 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 H2AFJQ9BTM1 129 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FICDQ9BVA6 458 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 APOL6Q9BWW8 343 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 MED28Q9H204 178 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SLC38A1Q9H2H9 487 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FKRPQ9H9S5 495 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 TPT1P8Q9HAU6 139 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 IL1RL2Q9HB29 575 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 POPDC2Q9HBU9 364 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ABCB9Q9NP78 766 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF302Q9NR11 478 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 SMCO4Q9NRQ5 59 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CENPMQ9NSP4 180 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RBFOX1Q9NWB1 397 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 GTSE1Q9NYZ3 720 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 C3orf18Q9UK00 162 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FBXL2Q9UKC9 423 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 RNF6Q9Y252 685 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 EXOGQ9Y2C4 368 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CARHSP1Q9Y2V2 147 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 FAM96BQ9Y3D0 163 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 ATG4BQ9Y4P1 393 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 PCDHGA5Q9Y5G8 931 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 KLK4Q9Y5K2 254 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 CLCA3PQ9Y6N3 262 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 EYSQ5T1H1 3165 aa3.8□□□□□ -1.8
ITGB1-219ENST00000534049 LAMA2P24043 3122 aaKnown RBP3.8□□□□□ -1.8
ITGB1-219ENST00000534049 DOCK1Q14185 1865 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 KIAA0100Q14667 2235 aaKnown RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 SPTBN5Q9NRC6 3674 aaKnown RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 TRIOBPQ9H2D6 2365 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms