RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ZNF84P51523 738 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 VLDLRP98155 873 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 LAPTM4AQ15012 233 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 PHYHD1Q5SRE7 291 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 PODNL1Q6PEZ8 512 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 TBPL2Q6SJ96 375 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 MEX3DQ86XN8 651 aaKnown RBP11.7□□□□□ -0.54
CAPN1-227ENST00000533909 SYT14Q8NB59 555 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 OR13C2Q8NGS9 318 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 SLC7A13Q8TCU3 470 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 SMAP2Q8WU79 429 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-227ENST00000533909 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 CCDC124Q96CT7 223 aaKnown RBP11.7□□□□□ -0.54
CAPN1-227ENST00000533909 FAM46AQ96IP4 442 aaKnown RBP11.7□□□□□ -0.54
CAPN1-227ENST00000533909 ZNF347Q96SE7 839 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 SEPHS2Q99611 448 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 TRIM15Q9C019 465 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 TMCC3Q9ULS5 477 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 LAMP3Q9UQV4 416 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 HIF3AQ9Y2N7 669 aa11.7□□□□□ -0.54
CAPN1-227ENST00000533909 TRAV27A0A087WT01 109 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 GYG2O15488 501 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 PRSS23O95084 383 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 GADD45GO95257 159 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 FARS2O95363 451 aaKnown RBP11.69□□□□□ -0.54
CAPN1-227ENST00000533909 CRYAAP02489 173 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 QDPRP09417 244 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 T-ENOLP0DO92 83 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 B4GALT1P15291 398 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 ARR3P36575 388 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 IFNGR2P38484 337 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 CTXN1P60606 82 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
CAPN1-227ENST00000533909 LSM11P83369 360 aaKnown RBP eCLIP11.69□□□□□ -0.54
CAPN1-227ENST00000533909 SPOCK1Q08629 439 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 CD47Q08722 323 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 NPRL3Q12980 569 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 TRIM25Q14258 630 aaKnown RBP11.69□□□□□ -0.54
CAPN1-227ENST00000533909 DNAL1Q4LDG9 190 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 NHLRC1Q6VVB1 395 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 ZDHHC21Q8IVQ6 265 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 ASB10Q8WXI3 467 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 POP5Q969H6 163 aaKnown RBP11.69□□□□□ -0.54
CAPN1-227ENST00000533909 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 ZNF837Q96EG3 531 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-227ENST00000533909 PERPQ96FX8 193 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 BOD1Q96IK1 185 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 C7orf34Q96L11 122 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 SLC38A2Q96QD8 506 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 FOXB1Q99853 325 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 THTPAQ9BU02 230 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 C1orf21Q9H246 121 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 TXNIPQ9H3M7 391 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 PLCE1Q9P212 2302 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 DSCAMO60469 2012 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 ARID1AO14497 2285 aa11.69□□□□□ -0.54
CAPN1-227ENST00000533909 HIVEP1P15822 2718 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 TRBV4-1A0A0J9YWV2 114 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 NPIPB13A6NJU9 1138 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 CENPBD1B2RD01 187 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 SHISA9B4DS77 424 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 NPIPB4C9JG80 1138 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 ATP6V1G2-DDX39BF2Z307 99 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 DHHO43323 396 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 TMCC2O75069 709 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 UBOX5O94941 541 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 RAB36O95755 333 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 ACADSP16219 412 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 ATP6V1B2P21281 511 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 FUT4P22083 530 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 ACVR1BP36896 505 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 GUCA1AP43080 201 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-227ENST00000533909 FABP6P51161 128 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 NKX6-1P78426 367 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-227ENST00000533909 MYBPC1Q00872 1141 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 TESK1Q15569 626 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 GSG1Q2KHT4 349 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 AGAP6Q5VW22 663 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 FAM205BPQ63HN1 556 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 TMPRSS11FQ6ZWK6 438 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 PIWIL3Q7Z3Z3 882 aaKnown RBP11.68□□□□□ -0.54
CAPN1-227ENST00000533909 IGFN1Q86VF2 1251 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 FBXL14Q8N1E6 418 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 OR4K5Q8NGD3 323 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 LILRB1Q8NHL6 650 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-227ENST00000533909 TNFRSF13CQ96RJ3 184 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 CXXC4Q9H2H0 198 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 IL1RAPQ9NPH3 570 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 TAS2R1Q9NYW7 299 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 GRHPRQ9UBQ7 328 aa11.68□□□□□ -0.54
CAPN1-227ENST00000533909 FLNAP21333 2647 aaKnown RBP11.68□□□□□ -0.54
CAPN1-227ENST00000533909 PRRC2AP48634 2157 aaKnown RBP11.67□□□□□ -0.54
CAPN1-227ENST00000533909 CELSR1Q9NYQ6 3014 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 UNC119BA6NIH7 251 aa11.67□□□□□ -0.54
CAPN1-227ENST00000533909 A6NIZ1 184 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms