RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MFSD13AQ14CX5 517 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF385BQ569K4 471 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 TCTEX1D4Q5JR98 221 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 PHYHD1Q5SRE7 291 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF627Q7L945 461 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 NLRC3Q7RTR2 1065 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 CCDC91Q7Z6B0 441 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 KRT77Q7Z794 578 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 CALHM3Q86XJ0 350 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 CTAGE3PQ8IX95 158 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 PDZD9Q8IXQ8 264 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 ARFGAP2Q8N6H7 521 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 OR8B3Q8NGG8 313 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 OR1J1Q8NGS3 322 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 OR5R1Q8NH85 324 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF483Q8TF39 744 aaPredicted RBP8.69□□□□□ -1.02
CSDE1-215ENST00000533818 WDFY2Q96P53 400 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 OR8B2Q96RD0 313 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 GPR61Q9BZJ8 451 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 A4GALTQ9NPC4 353 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 SH3BP4Q9P0V3 963 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 ZNRD1Q9P1U0 126 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 CLN8Q9UBY8 286 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 MKLN1Q9UL63 735 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 TMCO1Q9UM00 188 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 SLC35A3Q9Y2D2 325 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 HMX2A2RU54 273 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 C22orf46C9J442 243 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 TMEM178BH3BS89 294 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 AP3D1O14617 1153 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 SMIM24O75264 130 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 STX11O75558 287 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 MFN2O95140 757 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF205O95201 554 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 OPN1SWP03999 348 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 RPS17P08708 135 aaKnown RBP8.68□□□□□ -1.02
CSDE1-215ENST00000533818 GTF2E2P29084 291 aaKnown RBP8.68□□□□□ -1.02
CSDE1-215ENST00000533818 MPV17P39210 176 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 FRKP42685 505 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-215ENST00000533818 TP53BP2Q13625 1128 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 C1DQ13901 141 aaKnown RBP8.68□□□□□ -1.02
CSDE1-215ENST00000533818 MAPK14Q16539 360 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF718Q3SXZ3 478 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 TMEM255AQ5JRV8 349 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 SPATA46Q5T0L3 261 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 THEM4Q5T1C6 240 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 CARD17Q5XLA6 110 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 OLIG3Q7RTU3 272 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 COMTD1Q86VU5 262 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 LRRC8AQ8IWT6 810 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 FGFBP3Q8TAT2 258 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 PPCDCQ96CD2 204 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 SAMD8Q96LT4 415 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 OR2M2Q96R28 347 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 SLC19A3Q9BZV2 496 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 SEMA6AQ9H2E6 1030 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 MSL2Q9HCI7 577 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 PPP1R3CQ9UQK1 317 aa8.68□□□□□ -1.02
CSDE1-215ENST00000533818 CAB39Q9Y376 341 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-215ENST00000533818 LSM4Q9Y4Z0 139 aaKnown RBP8.68□□□□□ -1.02
CSDE1-215ENST00000533818 AKAP10O43572 662 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 SNAP29O95721 258 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 LIPFP07098 398 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 FAHP16930 419 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 TNFRSF1AP19438 455 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 CXCR1P25024 350 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 SSTR1P30872 391 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 HSD17B3P37058 310 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 CCT3P49368 545 aaKnown RBP8.67□□□□□ -1.02
CSDE1-215ENST00000533818 GUCY2DQ02846 1103 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 TBC1D28Q2M2D7 210 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 ZMAT1Q5H9K5 638 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 METTL11BQ5VVY1 283 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 WDR25Q64LD2 544 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-215ENST00000533818 SKA3Q8IX90 412 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 TMEM123Q8N131 208 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 OR1J2Q8NGS2 313 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 FAM76AQ8TAV0 307 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 NSMAFQ92636 917 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 MS4A14Q96JA4 679 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 OR7D2Q96RA2 312 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 LRMDAQ9H2I8 198 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 TCF7L2Q9NQB0 619 aa8.67□□□□□ -1.02
CSDE1-215ENST00000533818 EXOSC3Q9NQT5 275 aaKnown RBP8.67□□□□□ -1.02
CSDE1-215ENST00000533818 FRAS1Q86XX4 4008 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 FAM159BA6NKW6 160 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 CCDC159P0C7I6 412 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 TNFSF4P23510 183 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 CLCQ05315 142 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 FAM153CQ494X1 144 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 SPDYE7PQ495Y7 208 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 TEX35Q5T0J7 233 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 AP1ARQ63HQ0 302 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 GPRIN3Q6ZVF9 776 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 SNX32Q86XE0 403 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 C20orf196Q8IYI0 205 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 DTX3Q8N9I9 347 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 OR56A1Q8NGH5 318 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 OR5D16Q8NGK9 328 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF764Q96H86 408 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms