RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FUT1P19526 365 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 NPR2P20594 1047 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 KDELR2P33947 212 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 PDLIM4P50479 330 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 CLRN1P58418 232 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 ZP4Q12836 540 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 PIN1Q13526 163 aaPredicted RBP9.05□□□□□ -0.96
CAPN1-225ENST00000533704 DAG1Q14118 895 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 SWI5Q1ZZU3 235 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 C3orf36Q3SXR2 165 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 NHLRC1Q6VVB1 395 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 SVOPLQ8N434 492 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 FAM169BQ8N8A8 192 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 OR10H5Q8NGA6 315 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 OR6X1Q8NH79 312 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF566Q969W8 418 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 SGTBQ96EQ0 304 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 SLC19A3Q9BZV2 496 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 CCDC134Q9H6E4 229 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 DYNLRB1Q9NP97 96 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 MED4Q9NPJ6 270 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 GLTPQ9NZD2 209 aa9.05□□□□□ -0.96
CAPN1-225ENST00000533704 A0A1W2PRG6 482 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 SLC22A2O15244 555 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 PIP5K1CO60331 668 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 OR7A10O76100 309 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF682O95780 498 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 F12P00748 615 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-225ENST00000533704 IGHG1P01857 330 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 MT-ND1P03886 318 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 CSF3P09919 207 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 ASAH2BP0C7U1 165 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 SLC25A16P16260 332 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 AQP2P41181 271 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 RBM34P42696 430 aaKnown RBP9.04□□□□□ -0.96
CAPN1-225ENST00000533704 YAP1P46937 504 aaKnown RBP9.04□□□□□ -0.96
CAPN1-225ENST00000533704 GIPRP48546 466 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 RAB1AP62820 205 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 MYBPC1Q00872 1141 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 LIPEQ05469 1076 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 RPL18Q07020 188 aaKnown RBP9.04□□□□□ -0.96
CAPN1-225ENST00000533704 GGTLC2Q14390 218 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 RAB39AQ14964 217 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 ARPINQ7Z6K5 226 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 SKA3Q8IX90 412 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 SYT14Q8NB59 555 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 NUP37Q8NFH4 326 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 RP9Q8TA86 221 aaKnown RBP9.04□□□□□ -0.96
CAPN1-225ENST00000533704 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 TMEM239Q8WW34 195 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 LZICQ8WZA0 190 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 TMEM54Q969K7 222 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 SLC25A44Q96H78 314 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF426Q9BUY5 554 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 FAM107BQ9H098 131 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 C20orf141Q9NUB4 165 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 RHCGQ9UBD6 479 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 MED31Q9Y3C7 131 aa9.04□□□□□ -0.96
CAPN1-225ENST00000533704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.969e-8■■■□□ 16.4
CAPN1-225ENST00000533704 CXCR6O00574 342 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 DHHO43323 396 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 CD5LO43866 347 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 CCDC22O60826 627 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 PDE5AO76074 875 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 UBL3O95164 117 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 FARS2O95363 451 aaKnown RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 QDPRP09417 244 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 OR8G3PP0DMU2 310 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 IFI30P13284 250 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 IFNA8P32881 189 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 LSP1P33241 339 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 NUDT2P50583 147 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 SLC7A2P52569 658 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 SELENOWP63302 87 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 GALK2Q01415 458 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 GABPB1Q06547 395 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 TOP3AQ13472 1001 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 EFNB3Q15768 340 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 TMEM249Q2WGJ8 235 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 GKAP1Q5VSY0 366 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 LRFN4Q6PJG9 635 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 VTCN1Q7Z7D3 282 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 MEX3DQ86XN8 651 aaKnown RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 SLC15A3Q8IY34 581 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 ZCCHC24Q8N2G6 241 aaKnown RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 SLC22A24Q8N4F4 322 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 IL17RDQ8NFM7 739 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 MOSPD2Q8NHP6 518 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 TNFRSF13CQ96RJ3 184 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 ZNF347Q96SE7 839 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 SH3GL3Q99963 347 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 ELAC2Q9BQ52 826 aaKnown RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 PIMREGQ9BSJ6 248 aa9.03□□□□□ -0.96
CAPN1-225ENST00000533704 POLR2J2Q9GZM3 115 aaKnown RBP9.03□□□□□ -0.96
CAPN1-225ENST00000533704 RAB1BQ9H0U4 201 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms