RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ASB9Q96DX5 294 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 RADILQ96JH8 1075 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 CRNNQ9UBG3 495 aaPredicted RBP17.86■□□□□ 0.45
CCS-208ENST00000533244 MGAT4BQ9UQ53 548 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 DSCAMO60469 2012 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 CELSR1Q9NYQ6 3014 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 PLCE1Q9P212 2302 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 M0R1B8 84 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 IGHMP01871 453 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 MAGEA2P43356 314 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 GPR4P46093 362 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 OMPP47874 163 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 UBE2NP61088 152 aaKnown RBP17.85■□□□□ 0.45
CCS-208ENST00000533244 RUNX1T1Q06455 604 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 C3orf36Q3SXR2 165 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 LRFN4Q6PJG9 635 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 SPNS3Q6ZMD2 512 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 HDDC2Q7Z4H3 204 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 OAFQ86UD1 273 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 DHFR2Q86XF0 187 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 CDK20Q8IZL9 346 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 FAM169BQ8N8A8 192 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 OR13C2Q8NGS9 318 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 NEUROG1Q92886 237 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 CLPTM1LQ96KA5 538 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 C1QTNF6Q9BXI9 259 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 TXNIPQ9H3M7 391 aa17.85■□□□□ 0.45
CCS-208ENST00000533244 BEX4Q9NWD9 120 aaPredicted RBP17.85■□□□□ 0.45
CCS-208ENST00000533244 TRAV27A0A087WT01 109 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 ACOT8O14734 319 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 IGHG1P01857 330 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 ZNF133P52736 654 aaPredicted RBP17.84■□□□□ 0.45
CCS-208ENST00000533244 SMIM11AP58511 58 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 SPOCK1Q08629 439 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 TAF11Q15544 211 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 RRM2BQ7LG56 351 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 ZDHHC21Q8IVQ6 265 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 CCDC36Q8IYA8 594 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 NOXO1Q8NFA2 376 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 OR4K5Q8NGD3 323 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 OR51A7Q8NH64 312 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 PIGTQ969N2 578 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 FBXW5Q969U6 566 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 TNFRSF13CQ96RJ3 184 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 ZNF347Q96SE7 839 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 THTPAQ9BU02 230 aa17.84■□□□□ 0.45
CCS-208ENST00000533244 MOV10Q9HCE1 1003 aaKnown RBP17.84■□□□□ 0.45
CCS-208ENST00000533244 STX18Q9P2W9 335 aaKnown RBP17.84■□□□□ 0.45
CCS-208ENST00000533244 SH3PXD2BA1X283 911 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 ZNF503-AS2A6NEH8 195 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 MCIDASD6RGH6 385 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 TRMUO75648 421 aaKnown RBP17.83■□□□□ 0.45
CCS-208ENST00000533244 SEC14L2O76054 403 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 GADD45GO95257 159 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 IGKV3-15P01624 115 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 IGLV1-44P01699 117 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 ACADSP16219 412 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 ZNF26P17031 533 aaPredicted RBP17.83■□□□□ 0.45
CCS-208ENST00000533244 SPIBQ01892 262 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 DNAL1Q4LDG9 190 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 PGM2L1Q6PCE3 622 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 POP5Q969H6 163 aaKnown RBP17.83■□□□□ 0.45
CCS-208ENST00000533244 NMD3Q96D46 503 aaKnown RBP17.83■□□□□ 0.45
CCS-208ENST00000533244 FAM46AQ96IP4 442 aaKnown RBP17.83■□□□□ 0.45
CCS-208ENST00000533244 CCL19Q99731 98 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 FOXB1Q99853 325 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 MAGIXQ9H6Y5 334 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 POFUT2Q9Y2G5 429 aa17.83■□□□□ 0.45
CCS-208ENST00000533244 IGHV1-18A0A0C4DH31 117 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 DHHO43323 396 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 TMCC2O75069 709 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 DANCRP0C864 163 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 TUBA1BP68363 451 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 TUBA4AP68366 448 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 ZBED5Q49AG3 693 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 ZNF813Q6ZN06 617 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 TUBA1AQ71U36 451 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 OR52J3Q8NH60 311 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 CCDC124Q96CT7 223 aaKnown RBP17.82■□□□□ 0.44
CCS-208ENST00000533244 SLC38A2Q96QD8 506 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 KCNK17Q96T54 332 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 B3GNT2Q9NY97 397 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 SIGLEC7Q9Y286 467 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 HIVEP1P15822 2718 aa17.82■□□□□ 0.44
CCS-208ENST00000533244 GYG2O15488 501 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 PTP4A3O75365 173 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 B4GALT1P15291 398 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 CBR1P16152 277 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 RRM2P31350 389 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 CDH11P55287 796 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 CLRN1P58418 232 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 CTXN1P60606 82 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 RPL27P61353 136 aaKnown RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 TRAP1Q12931 704 aaKnown RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 BNIP1Q12981 228 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 IGFN1Q86VF2 1251 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 ZNF519Q8TB69 540 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 HDAC2Q92769 488 aaKnown RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 MCHR2Q969V1 340 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms