RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	GRAMD2A	Q8IUY3	354 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	SLC22A9	Q8IVM8	553 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	ZDHHC21	Q8IVQ6	265 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	C1orf87	Q8N0U7	546 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	TBC1D19	Q8N5T2	526 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	PARP16	Q8N5Y8	322 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	SCCPDH	Q8NBX0	429 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	OR52B4	Q8NGK2	314 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	ZNF671	Q8TAW3	534 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	C10orf105	Q8TEF2	133 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	MS4A6E	Q96DS6	147 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	CSF3R	Q99062	836 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	KRT12	Q99456	494 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	NMNAT2	Q9BZQ4	307 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	PKIB	Q9C010	78 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	WWTR1	Q9GZV5	400 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	RNF122	Q9H9V4	155 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	PELI2	Q9HAT8	420 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	PARVB	Q9HBI1	364 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	TEX10	Q9NXF1	929 aa	Predicted RBP	4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.95	□□□□□ -1.62
PUM1-222	ENST00000531867	RNF115	Q9Y4L5	304 aa		4.95	□□□□□ -1.62
PUM1-222	ENST00000531867		A0A1W2PP18	115 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	SLC22A20	A6NK97	555 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	BTNL10	A8MVZ5	291 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	LDB3	O75112	727 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	WBP4	O75554	376 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CBR3	O75828	277 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	C8G	P07360	202 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	YES1	P07947	543 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	OR2T7	P0C7T2	308 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	SAG	P10523	405 aa	Predicted RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	OGN	P20774	298 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	HNRNPH1	P31943	449 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	RPL22	P35268	128 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	GCK	P35557	465 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CAPG	P40121	348 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	PTGDS	P41222	190 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	SLC9A3	P48764	834 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	STAR	P49675	285 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	NUDT6	P53370	316 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CLDN15	P56746	228 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	FBXW4	P57775	412 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	STXBP1	P61764	594 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	IRX1	P78414	480 aa	Predicted RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	BIK	Q13323	160 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CUL1	Q13616	776 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	RBMS2	Q15434	407 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CARTPT	Q16568	116 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	MIDN	Q504T8	468 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	C6orf10	Q5SRN2	563 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	PRAMEF7	Q5VXH5	474 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	C11orf71	Q6IPW1	123 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	UGT3A1	Q6NUS8	523 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	ZNF549	Q6P9A3	640 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CLEC2A	Q6UVW9	174 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	MBOAT1	Q6ZNC8	495 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	DGAT2L6	Q6ZPD8	337 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	NUDT13	Q86X67	352 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CNEP1R1	Q8N9A8	125 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	WDSUB1	Q8N9V3	476 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	BHLHE23	Q8NDY6	225 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	OR1J4	Q8NGS1	313 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CD200R1	Q8TD46	325 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	NEUROG1	Q92886	237 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	SNAPC3	Q92966	411 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	NEIL2	Q969S2	332 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	PYCR2	Q96C36	320 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	NDN	Q99608	321 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	KIFC1	Q9BW19	673 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	LYRM4	Q9HD34	91 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	HINT3	Q9NQE9	182 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	CHMP2B	Q9UQN3	213 aa		4.94	□□□□□ -1.62
PUM1-222	ENST00000531867	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-222	ENST00000531867		A0A075B6Q4	140 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	GOLGA8O	A6NCC3	632 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	FAM90A10P	A6NDY2	464 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	CXorf65	A6NEN9	183 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	MFSD2B	A6NFX1	497 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	ANKDD1B	A6NHY2	528 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867		E5RI56	91 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	GOLGA8N	F8WBI6	632 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	KIF2A	O00139	706 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	SLC28A1	O00337	649 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	PFDN6	O15212	129 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	ERI3	O43414	337 aa	Known RBP	4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	ZIC3	O60481	467 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	E2F6	O75461	281 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	VAPB	O95292	243 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	AIFM1	O95831	613 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	GYPC	P04921	128 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	LCK	P06239	509 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	CSF3	P09919	207 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	CLU	P10909	449 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	PSMB1	P20618	241 aa	Known RBP	4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	ATP6V1C1	P21283	382 aa		4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	ZNF10	P21506	573 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-222	ENST00000531867	FDFT1	P37268	417 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms