RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 IGHMP01871 453 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 CD3EP07766 207 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 BSPH1Q075Z2 132 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 TAF11Q15544 211 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 FAM98BQ52LJ0 330 aaKnown RBP16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 ARMC4Q5T2S8 1044 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 AQP12AQ8IXF9 295 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 NOXO1Q8NFA2 376 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 NINJ1Q92982 152 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 ALPK1Q96QP1 1244 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 TNFRSF13CQ96RJ3 184 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 CADM1Q9BY67 442 aaKnown RBP16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 EDARQ9UNE0 448 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 AURKCQ9UQB9 309 aa16.64■□□□□ 0.25
PACSIN3-208ENST00000531226 A0A096LPE4 126 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 A0A1W2PPZ6 126 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 KRT36O76013 467 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 HOXB1P14653 301 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 ACADSP16219 412 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF83P51522 516 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 CLRN1P58418 232 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 CTXN1P60606 82 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 UBE2NP61088 152 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 RUNX1T1Q06455 604 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 ZBED5Q49AG3 693 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 KLHL17Q6TDP4 642 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 IGFN1Q86VF2 1251 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 MRPL13Q9BYD1 178 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 PLEKHA6Q9Y2H5 1048 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 CSMD2Q7Z408 3487 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 MYO9AB2RTY4 2548 aa16.63■□□□□ 0.25
PACSIN3-208ENST00000531226 M0R1B8 84 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 TRMUO75648 421 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 SEC14L2O76054 403 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 RAF1P04049 648 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 RAP2AP10114 183 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 PAX7P23759 505 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 PTAFRP25105 342 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 HMGA2P52926 109 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 RPL27P61353 136 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 TOP3AQ13472 1001 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 FLOT2Q14254 428 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 HIST3H3Q16695 136 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 TMEM108Q6UXF1 575 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF627Q7L945 461 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 ADGRG5Q8IZF4 528 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 RSRC1Q96IZ7 334 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 FOXB1Q99853 325 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 C1QTNF6Q9BXI9 259 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 NDEL1Q9GZM8 345 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 UBTD1Q9HAC8 227 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF346Q9UL40 294 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 TMCC3Q9ULS5 477 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 POMPQ9Y244 141 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 SIGLEC7Q9Y286 467 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 POFUT2Q9Y2G5 429 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 LYVE1Q9Y5Y7 322 aa16.62■□□□□ 0.25
PACSIN3-208ENST00000531226 CCDC168Q8NDH2 2452 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 ABCD4O14678 606 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 OR10H3O60404 316 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 PTP4A3O75365 173 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 ATE1O95260 518 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF26P17031 533 aaPredicted RBP16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 DNASE1P24855 282 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 CD40P25942 277 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 FAM205BPQ63HN1 556 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 ADAM5Q6NVV9 412 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 LRFN4Q6PJG9 635 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF813Q6ZN06 617 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 ZER1Q7Z7L7 766 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 KBTBD8Q8NFY9 601 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 HDAC2Q92769 488 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 TSPAN32Q96QS1 320 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 GPA33Q99795 319 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 KATNB1Q9BVA0 655 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 CCM2LQ9NUG4 571 aaPredicted RBP16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 SLC7A8Q9UHI5 535 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 MGAT4BQ9UQ53 548 aa16.61■□□□□ 0.25
PACSIN3-208ENST00000531226 DHRS12A0PJE2 317 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 UNC119BA6NIH7 251 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 TNFRSF11BO00300 401 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 DHHO43323 396 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 NDUFB2O95178 105 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 CD14P08571 375 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 QDPRP09417 244 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 B4GALT1P15291 398 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 RPL4P36578 427 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 IFNGR2P38484 337 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 ZNF133P52736 654 aaPredicted RBP16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 IST1P53990 364 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 TUBA1BP68363 451 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 TUBA4AP68366 448 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 KEAP1Q14145 624 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 OR2T5Q6IEZ7 315 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 C20orf204Q6ZNR8 217 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 TUBA1AQ71U36 451 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 CCDC36Q8IYA8 594 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 SYT14Q8NB59 555 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 OR4C15Q8NGM1 316 aa16.6■□□□□ 0.25
PACSIN3-208ENST00000531226 OR2T29Q8NH02 315 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms