RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SLAMF1Q13291 335 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 DDX39BQ13838 428 aaKnown RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 ACSF3Q4G176 576 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 FAAP20Q6NZ36 180 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 DGAT2L6Q6ZPD8 337 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 GTSCR1Q86UQ5 136 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 CDC20BQ86Y33 519 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 LACC1Q8IV20 430 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 ST13P4Q8IZP2 240 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 RELL2Q8NC24 303 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 BBOF1Q8ND07 529 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 OR7G3Q8NG95 312 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 OR10G3Q8NGC4 313 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 OR11H4Q8NGC9 324 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 NEIL3Q8TAT5 605 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 FAM222BQ8WU58 562 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 PPWD1Q96BP3 646 aaKnown RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 CMTM7Q96FZ5 175 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 VGLL1Q99990 258 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 CENPKQ9BS16 269 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 DOHHQ9BU89 302 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 WWTR1Q9GZV5 400 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 OR51B5Q9H339 312 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 LIME1Q9H400 295 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 RPF2Q9H7B2 306 aaKnown RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 SH2D2AQ9NP31 389 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 QPCTLQ9NXS2 382 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 NUDT4Q9NZJ9 180 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 CNIH4Q9P003 139 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 OPTCQ9UBM4 332 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 MTRF1LQ9UGC7 380 aaKnown RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 PTBP2Q9UKA9 531 aaKnown RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 PLEKHA6Q9Y2H5 1048 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 CHCHD2Q9Y6H1 151 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-213ENST00000530784 SCN3AQ9NY46 2000 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 C2CD3Q4AC94 2353 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 AKAP9Q99996 3911 aa5.8□□□□□ -1.48
CSDE1-213ENST00000530784 SUPT3HB4E1H0 165 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CCDC188H7C350 402 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 K7EPI3 171 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 SUPT3HO75486 399 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 LRATO95237 230 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 GP5P40197 560 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 RPL21P46778 160 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 TMED10P49755 219 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 RAB10P61026 200 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 HERV-K104P61576 105 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 HERVK_113P63132 956 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ERVK-8P63133 956 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 BIKQ13323 160 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 SLMAPQ14BN4 828 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 EBPQ15125 230 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ZKSCAN8Q15776 578 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CTU2Q2VPK5 515 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 FBXL19-AS1Q494R0 122 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ELFN2Q5R3F8 820 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 OR4C11Q6IEV9 310 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 PAMR1Q6UXH9 720 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CAMKMTQ7Z624 323 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 RTN4RL2Q86UN3 420 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CDK20Q8IZL9 346 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 KIRREL3Q8IZU9 778 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ZCCHC7Q8N3Z6 543 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 STAG3L4Q8TBR4 150 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 DOK4Q8TEW6 326 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 PYROXD1Q8WU10 500 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 UBTD2Q8WUN7 234 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 RIT1Q92963 219 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 RNASE6Q93091 150 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 C18orf12Q96KH6 178 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 SFXN2Q96NB2 322 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 GPR22Q99680 433 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 RBBP8Q99708 897 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CPNE1Q99829 537 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 URM1Q9BTM9 101 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CABLES2Q9BTV7 478 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CLEC7AQ9BXN2 247 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ERVK-6Q9BXR3 956 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ALG9Q9H6U8 611 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 NOL11Q9H8H0 719 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ANKZF1Q9H8Y5 726 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ACTR8Q9H981 624 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 WDR41Q9HAD4 459 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 LYARQ9NX58 379 aaKnown RBP5.79□□□□□ -1.48
CSDE1-213ENST00000530784 ERVK-19Q9WJR5 959 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 CCDC168Q8NDH2 2452 aa5.79□□□□□ -1.48
CSDE1-213ENST00000530784 PKDREJQ9NTG1 2253 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 C2orf92A0A1B0GVN3 265 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 TCRBV9S1A1TA0A576 114 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 TUBAL3A6NHL2 446 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 EEF1E1-BLOC1S5C9J1V9 151 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 UBXN8O00124 270 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 PLPP1O14494 284 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 TP53I11O14683 189 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 EEF1E1O43324 174 aaKnown RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 KERAO60938 352 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 TRIM3O75382 744 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-213ENST00000530784 TRAPPC6AO75865 159 aa5.78□□□□□ -1.48
CSDE1-213ENST00000530784 SNX4O95219 450 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms