RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PRRG2O14669 202 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ARPC3O15145 178 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 XPNPEP2O43895 674 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 WBP4O75554 376 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 VAMP5O95183 116 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 GPANK1O95872 356 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 IGHMP01871 453 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 HMGN1P05114 100 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 STSP08842 583 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 PYCR1P32322 319 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 CLRN1P58418 232 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 RPS7P62081 194 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 FOXF2Q12947 444 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ITGADQ13349 1161 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ZNF362Q5T0B9 420 aaPredicted RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 LYPD4Q6UWN0 246 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NHLRC1Q6VVB1 395 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 SEM1Q6ZVN7 128 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 AAED1Q7RTV5 226 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NUFIP2Q7Z417 695 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 DOLPP1Q86YN1 238 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 DEPDC4Q8N2C3 294 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ZNF786Q8N393 782 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NPEPL1Q8NDH3 523 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ZNRF4Q8WWF5 429 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NSMAFQ92636 917 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 WBP1Q96G27 269 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ALKBH3Q96Q83 286 aaPredicted RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 OR2M2Q96R28 347 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 PRRG3Q9BZD7 231 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NOSIPQ9Y314 301 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 ZNF175Q9Y473 711 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 IGKV1D-43A0A0B4J1Z2 117 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 TRGV8A0A0C4DH27 118 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 PRSS37A4D1T9 235 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ZNF726A6NNF4 738 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 PRR23D1E9PI22 279 aaPredicted RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 DCTN6O00399 190 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 DENRO43583 198 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 TRMUO75648 421 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 PRR23D2P0DMB1 279 aaPredicted RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 FCGR2AP12318 317 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ACADSP16219 412 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 GABRB1P18505 474 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 AGTR1P30556 359 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 CENPAP49450 140 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 PER3P56645 1201 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 IL18R1Q13478 541 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 POU4F3Q15319 338 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 PHYHD1Q5SRE7 291 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 GPR139Q6DWJ6 353 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 LAIR2Q6ISS4 152 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ADGRE4PQ86SQ3 457 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 SLC43A2Q8N370 569 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 NAXEQ8NCW5 288 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 BPIFB6Q8NFQ5 453 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 OR8J1Q8NGP2 316 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 OR6N1Q8NGY5 312 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 ZNF566Q969W8 418 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 SF3B5Q9BWJ5 86 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 RNF122Q9H9V4 155 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
SOX6-213ENST00000530378 ASB6Q9NWX5 421 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 EMC3Q9P0I2 261 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 KLHL21Q9UJP4 597 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 OSGIN2Q9Y236 505 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 LRCH1Q9Y2L9 728 aa9.45□□□□□ -0.9
SOX6-213ENST00000530378 CACNA1CQ13936 2221 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 SLC22A23A1A5C7 686 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 AHRRA9YTQ3 701 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 WDR1O75083 606 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 SEC14L2O76054 403 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 TOXO94900 526 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 TXNDC12O95881 172 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 RENP00797 406 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 IGHG1P01857 330 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 MRPL3P09001 348 aaKnown RBP9.44□□□□□ -0.9
SOX6-213ENST00000530378 PGA4P0DJD7 388 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 PGA3P0DJD8 388 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 APEHP13798 732 aaKnown RBP9.44□□□□□ -0.9
SOX6-213ENST00000530378 CTLA4P16410 223 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 CSNK1A1P48729 337 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 RBPJQ06330 500 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 CDK5R2Q13319 367 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 APOFQ13790 326 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 RNPS1Q15287 305 aaKnown RBP9.44□□□□□ -0.9
SOX6-213ENST00000530378 ETFDHQ16134 617 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 IGFBP7Q16270 282 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 C9orf135Q5VTT2 229 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 NSUN5P2Q63ZY6 315 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 VWA1Q6PCB0 445 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 B3GNT6Q6ZMB0 384 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 SHFQ7M4L6 423 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 TMEM123Q8N131 208 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 MARVELD2Q8N4S9 558 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 PROKR2Q8NFJ6 384 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 OR6K6Q8NGW6 343 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 RHOXF1Q8NHV9 184 aa9.44□□□□□ -0.9
SOX6-213ENST00000530378 SMAP2Q8WU79 429 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms