RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SLC3A1Q07837 685 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 CAMK2DQ13557 499 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 MOGQ16653 247 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 FAM209AQ5JX71 171 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 HHATQ5VTY9 493 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 HIST2H2BDQ6DRA6 164 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 LEG1Q6P5S2 330 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 ZNF836Q6ZNA1 936 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 ZNF621Q6ZSS3 439 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 USP51Q70EK9 711 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 TRIML2Q8N7C3 387 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 VPS33AQ96AX1 596 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 ELMOD3Q96FG2 381 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 OR2M2Q96R28 347 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 ARMC7Q9H6L4 198 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 B3GAT1Q9P2W7 334 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 CMYA5Q8N3K9 4069 aa8.88□□□□□ -0.99
COPB1-207ENST00000529866 FTCDNL1E5RQL4 147 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 OR2T1O43869 369 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 KNG1P01042 644 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 BCHEP06276 602 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 NR2F1P10589 423 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 HOXB9P17482 250 aaPredicted RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 MDKP21741 143 aaPredicted RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 ACAA2P42765 397 aaKnown RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 RPS5P46782 204 aaKnown RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 MTNR1AP48039 350 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 MAGOHP61326 146 aaKnown RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 RAB1AP62820 205 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 PDCD4Q53EL6 469 aaKnown RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 CARD17Q5XLA6 110 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 ATG16L1Q676U5 607 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 ZNF627Q7L945 461 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 UEVLDQ8IX04 471 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 C20orf196Q8IYI0 205 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 TMEM123Q8N131 208 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 CLIP4Q8N3C7 705 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 CPEB3Q8NE35 698 aaKnown RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 SYNPRQ8TBG9 265 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 C11orf40Q8WZ69 217 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 TLCD1Q96CP7 247 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 LRR1Q96L50 414 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 CCT8L2Q96SF2 557 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 FOXB1Q99853 325 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 ULBP2Q9BZM5 246 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 UBAP1Q9NZ09 502 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 ZNF69Q9UC07 566 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 TESQ9UGI8 421 aaKnown RBP8.87□□□□□ -0.99
COPB1-207ENST00000529866 MMP24Q9Y5R2 645 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 AUP1Q9Y679 476 aa8.87□□□□□ -0.99
COPB1-207ENST00000529866 IGLV3-9A0A075B6K5 115 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 M0R082 166 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 RFXANKO14593 260 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 TRAF3IP2O43734 574 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 ALX3O95076 343 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 SERPINA5P05154 406 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 NUDT7P0C024 238 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 DRD4P21917 467 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 RBBP4Q09028 425 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 RAB39AQ14964 217 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 MFSD13AQ14CX5 517 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 LARS2Q15031 903 aaKnown RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 SLC9A3R2Q15599 337 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 FAM69AQ5T7M9 428 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 RNF220Q5VTB9 566 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 NXNQ6DKJ4 435 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 C5orf46Q6UWT4 87 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 H1FNTQ75WM6 255 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 SPATC1Q76KD6 591 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 ZNF771Q7L3S4 317 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 COMTD1Q86VU5 262 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 C10orf111Q8N326 155 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 GLB1L3Q8NCI6 653 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 DEFB108BQ8NET1 73 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 OR6N1Q8NGY5 312 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 OR52P1PQ8NH57 321 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 ZNF417Q8TAU3 575 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 CCL17Q92583 94 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 UBE2FQ969M7 185 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 TMIGD2Q96BF3 282 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 KTI12Q96EK9 354 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 C1orf147Q96MC9 270 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 ZNF75AQ96N20 296 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 ZNF587Q96SQ5 575 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 PTDSS2Q9BVG9 487 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 MS4A7Q9GZW8 240 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 C1orf198Q9H425 327 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 CDH20Q9HBT6 801 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 TMBIM4Q9HC24 238 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 SDR39U1Q9NRG7 319 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 THAP1Q9NVV9 213 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 CALML5Q9NZT1 146 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 P2RX2Q9UBL9 471 aa8.86□□□□□ -0.99
COPB1-207ENST00000529866 PURGQ9UJV8 347 aaKnown RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 ZNF443Q9Y2A4 671 aaPredicted RBP8.86□□□□□ -0.99
COPB1-207ENST00000529866 LOC102725191A0A1B0GVB3 256 aa8.85□□□□□ -0.99
COPB1-207ENST00000529866 TRPC5OSA6NMA1 111 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms