RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MXRA5Q9NR99 2828 aa6.16□□□□□ -1.42
ITGB1-218ENST00000528877 CSPG4Q6UVK1 2322 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 JMJD1CQ15652 2540 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TRIM64A6NGJ6 449 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TRIM64BA6NI03 449 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 E7EQL1 145 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 SLC43A1O75387 559 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 PDE5AO76074 875 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 LYPD3O95274 346 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 IGKV3-15P01624 115 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 PI3P19957 117 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 GRPRP30550 384 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TTKP33981 857 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF83P51522 516 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CDH12P55289 794 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 KRTAP1-1Q07627 177 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 PUDPQ08623 228 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CYLC2Q14093 348 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-218ENST00000528877 VEZF1Q14119 521 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 DUSP7Q16829 419 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 VMACQ2NL98 169 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TBRG1Q3YBR2 411 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 HIKESHIQ53FT3 197 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 REP15Q6BDI9 236 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 NANOGP8Q6NSW7 305 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 NIPAL3Q6P499 406 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 ANKRD16Q6P6B7 361 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 KLHL24Q6TFL4 600 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CLEC9AQ6UXN8 241 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 WDR88Q6ZMY6 472 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 PXKQ7Z7A4 578 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CCDC36Q8IYA8 594 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CIARTQ8N365 385 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-218ENST00000528877 PIK3C3Q8NEB9 887 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 OR6T1Q8NGN1 323 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 BCL2L2Q92843 193 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TAMM41Q96BW9 452 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 LRRC58Q96CX6 371 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 THOC1Q96FV9 657 aaKnown RBP6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TRMT61AQ96FX7 289 aaKnown RBP6.15□□□□□ -1.42
ITGB1-218ENST00000528877 MPP4Q96JB8 637 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 MOGAT1Q96PD6 335 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 NANOGQ9H9S0 305 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 FKRPQ9H9S5 495 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 TMEM27Q9HBJ8 222 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 SAR1AQ9NR31 198 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CBLN4Q9NTU7 201 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 CISD1Q9NZ45 108 aaKnown RBP6.15□□□□□ -1.42
ITGB1-218ENST00000528877 SELENONQ9NZV5 590 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 SLC13A4Q9UKG4 626 aa6.15□□□□□ -1.42
ITGB1-218ENST00000528877 ATRQ13535 2644 aa6.15□□□□□ -1.43
ITGB1-218ENST00000528877 A0A096LNT2 108 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 IGHV1-18A0A0C4DH31 117 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 TRAPPC13A5PLN9 417 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ZNF99A8MXY4 864 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-218ENST00000528877 FAM220BPB1ANY3 271 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ATP6V1G2-DDX39BF2Z307 99 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 MS4A18H0YCH9 400 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 M0R1B8 84 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 M0R3H8 397 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 PLPP3O14495 311 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 MRASO14807 208 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 UPK3AO75631 287 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 HPRP00739 348 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 OPN1SWP03999 348 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 THY1P04216 161 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 VIMP08670 466 aaKnown RBP6.14□□□□□ -1.43
ITGB1-218ENST00000528877 CDKN1AP38936 164 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 RBM34P42696 430 aaKnown RBP6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ARFIP2P53365 341 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 CLDN17P56750 224 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ROR2Q01974 943 aaKnown RBP6.14□□□□□ -1.43
ITGB1-218ENST00000528877 POU3F1Q03052 451 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-218ENST00000528877 LTBQ06643 244 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 LGALS3BPQ08380 585 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 KLF10Q13118 480 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 CLEC12BQ2HXU8 276 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 MS4A18Q3C1V0 323 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 RABL3Q5HYI8 236 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ENTPD8Q5MY95 495 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 C9orf135Q5VTT2 229 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 HMBOX1Q6NT76 420 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ERICH5Q6P6B1 374 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 SLC22A25Q6T423 547 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ARPINQ7Z6K5 226 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 UEVLDQ8IX04 471 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 C20orf196Q8IYI0 205 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 MUC15Q8N387 334 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 SMYD1Q8NB12 490 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 NUP37Q8NFH4 326 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 OR4D11Q8NGI4 311 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 OR10A6Q8NH74 314 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 ADAMTS16Q8TE57 1224 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 C10orf82Q8WW14 230 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 SLC25A36Q96CQ1 311 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 SLC38A2Q96QD8 506 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 SEPHS2Q99611 448 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 MCHR1Q99705 422 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 SMR3AQ99954 134 aa6.14□□□□□ -1.43
ITGB1-218ENST00000528877 GPR35Q9HC97 309 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms