RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SF3A3Q12874 501 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHD7-208ENST00000528280 PIN1Q13526 163 aaPredicted RBP8.35□□□□□ -1.07
CHD7-208ENST00000528280 TAF11Q15544 211 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 EFNB3Q15768 340 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 SWI5Q1ZZU3 235 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 GSG1Q2KHT4 349 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 NRN1LQ496H8 165 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 DEF8Q6ZN54 512 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 DNM1P46Q6ZS02 220 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 RRM2BQ7LG56 351 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 SPATA21Q7Z572 469 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 NANOGNBQ7Z5D8 188 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 CPLX4Q7Z7G2 160 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 SLC15A3Q8IY34 581 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 RNF113BQ8IZP6 322 aaKnown RBP8.35□□□□□ -1.07
CHD7-208ENST00000528280 ANKS4BQ8N8V4 417 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 ZNF540Q8NDQ6 660 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 OR10H5Q8NGA6 315 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 FNDC8Q8TC99 324 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 TMEM54Q969K7 222 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 RCN3Q96D15 328 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 SGTBQ96EQ0 304 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 FOXB1Q99853 325 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 PRSS27Q9BQR3 290 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 RAB1BQ9H0U4 201 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 KCNN2Q9H2S1 579 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 ZNF442Q9H7R0 627 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 MYOZ1Q9NP98 299 aaPredicted RBP8.35□□□□□ -1.07
CHD7-208ENST00000528280 CA10Q9NS85 328 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 MED29Q9NX70 200 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 B3GNT2Q9NY97 397 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 ARMCX1Q9P291 453 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
CHD7-208ENST00000528280 SLC22A23A1A5C7 686 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 NPIPB13A6NJU9 1138 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 NPIPB4C9JG80 1138 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 RNF223E7ERA6 249 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 LRRN3E7EW58 273 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 NDUFS8O00217 210 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 TLX2O43763 284 aaPredicted RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 SERPINI2O75830 405 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 OR7A10O76100 309 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 RAB36O95755 333 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 THY1P04216 161 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 IFNW1P05000 195 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 OR4A8P0C604 315 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 CD79AP11912 226 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 NPR2P20594 1047 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 DRD4P21917 467 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 GUCA1AP43080 201 aaPredicted RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 OR1E2P47887 323 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 EVX1P49640 407 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 ZNF84P51523 738 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 CRYBA2P53672 197 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 CLRN1P58418 232 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 RAB1AP62820 205 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 LIPEQ05469 1076 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 SPOCK1Q08629 439 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 TRAM2Q15035 370 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 LRRC23Q53EV4 343 aaPredicted RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 B3GLCTQ6Y288 498 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 WDR88Q6ZMY6 472 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 FKBP9P1Q75LS8 142 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 MDP1Q86V88 176 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 CYP4Z1Q86W10 505 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 GEMIN6Q8WXD5 167 aaKnown RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 FAM168AQ92567 244 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 FBXO17Q96EF6 278 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 ZNF837Q96EG3 531 aaPredicted RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 PRRC1Q96M27 445 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 ELAC2Q9BQ52 826 aaKnown RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 FNDC11Q9BVV2 318 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 NDEL1Q9GZM8 345 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 LRMDAQ9H2I8 198 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 NELFAQ9H3P2 528 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 C1orf198Q9H425 327 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 MEPEQ9NQ76 525 aaPredicted RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 INIPQ9NRY2 104 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 CMTM6Q9NX76 183 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 GDF2Q9UK05 429 aaPredicted RBP8.34□□□□□ -1.07
CHD7-208ENST00000528280 RPS6KA6Q9UK32 745 aa8.34□□□□□ -1.07
CHD7-208ENST00000528280 MCIDASD6RGH6 385 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 CXCR6O00574 342 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 KPNA4O00629 521 aaPredicted RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 DHHO43323 396 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 SERPINA5P05154 406 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 QDPRP09417 244 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 ACADSP16219 412 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 PTNP21246 168 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 NR4A1P22736 598 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 IDH3GP51553 393 aaPredicted RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 SELENOVP59797 346 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 RPS23P62266 143 aaKnown RBP8.33□□□□□ -1.08
CHD7-208ENST00000528280 GALK2Q01415 458 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 PLP2Q04941 152 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 NPRL3Q12980 569 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 DAG1Q14118 895 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 ADIPOQQ15848 244 aa8.33□□□□□ -1.08
CHD7-208ENST00000528280 HIST3H3Q16695 136 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms