RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GMNCA6NCL1 334 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 BLOC1S5-TXNDC5H3BN57 136 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 PGA4P0DJD7 388 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 PGA3P0DJD8 388 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 IDH3GP51553 393 aaPredicted RBP28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 RAB35Q15286 201 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 SWI5Q1ZZU3 235 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 KRTAP21-3Q3LHN1 58 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 PIWIL3Q7Z3Z3 882 aaKnown RBP28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 VTCN1Q7Z7D3 282 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 SEPHS2Q99611 448 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 KCTD14Q9BQ13 255 aaPredicted RBP28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 SEC61A2Q9H9S3 476 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 PMF1-BGLAPU3KQ54 211 aa28.69■■■□□ 2.18
SSSCA1-205ENST00000527920 A0A1W2PRG6 482 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 NPIPB13A6NJU9 1138 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 NPIPB4C9JG80 1138 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 IGHG1P01857 330 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 HOXB4P17483 251 aaPredicted RBP28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 CALCRP30988 508 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 CAPZA2P47755 286 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 PSME3P61289 254 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 GSG1Q2KHT4 349 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 MST1LQ2TV78 715 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 IFI44LQ53G44 452 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 MYPOPQ86VE0 399 aaPredicted RBP28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 ZNF442Q9H7R0 627 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 SPAG4Q9NPE6 437 aa28.68■■■□□ 2.18
SSSCA1-205ENST00000527920 IGHV2OR16-5A0A0B4J2B6 119 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 ZNF682O95780 498 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 HLA-HP01893 362 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 CELA3BP08861 270 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 B4GALT1P15291 398 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 SERPINF1P36955 418 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 DAP3P51398 398 aaKnown RBP28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 NUDT6P53370 316 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 DSCR9P59020 149 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 MELKQ14680 651 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 HIST3H3Q16695 136 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 LRFN4Q6PJG9 635 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 REG4Q9BYZ8 158 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 INIPQ9NRY2 104 aa28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 STX18Q9P2W9 335 aaKnown RBP28.67■■■□□ 2.18
SSSCA1-205ENST00000527920 HGFACQ04756 655 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 NPRL3Q12980 569 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 EFNB3Q15768 340 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 ADIPOQQ15848 244 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 MRPL13Q9BYD1 178 aaKnown RBP28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 MAN2C1Q9NTJ4 1040 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 ZNF224Q9NZL3 707 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 FBXO9Q9UK97 447 aaPredicted RBP28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 FBXL3Q9UKT7 428 aa28.66■■■□□ 2.18
SSSCA1-205ENST00000527920 HIVEP2P31629 2446 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 SERPINA1P01009 418 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 AQP2P41181 271 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 NRN1LQ496H8 165 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 BPIFA2Q96DR5 249 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 FBXO17Q96EF6 278 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 HSH2DQ96JZ2 352 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 ZNF75AQ96N20 296 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 FNDC11Q9BVV2 318 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 HIF3AQ9Y2N7 669 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 SNX13Q9Y5W8 968 aa28.65■■■□□ 2.18
SSSCA1-205ENST00000527920 B9A039 149 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 RNF223E7ERA6 249 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 DHHO43323 396 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 SSX4O60224 188 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 UBL3O95164 117 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 F13BP05160 661 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 CD79AP11912 226 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 SNRPD2P62316 118 aaKnown RBP28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 TRAM2Q15035 370 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 Q71RC1 249 aaPredicted RBP28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 FKBP9P1Q75LS8 142 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 NOXO1Q8NFA2 376 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 ASB10Q8WXI3 467 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 NOX3Q9HBY0 568 aa28.64■■■□□ 2.18
SSSCA1-205ENST00000527920 FN1P02751 2386 aaKnown RBP28.64■■■□□ 2.17
SSSCA1-205ENST00000527920 MCIDASD6RGH6 385 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 FFAR1O14842 300 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 PRSS23O95084 383 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 OR4A8P0C604 315 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 ZNF14P17017 642 aaPredicted RBP28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 EFNA4P52798 201 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 CLEC2AQ6UVW9 174 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 DPPA2Q7Z7J5 298 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 RNF113BQ8IZP6 322 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 OR10H5Q8NGA6 315 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 FAM162AQ96A26 154 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 RHNO1Q9BSD3 238 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 ANKRD19PQ9H560 264 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 TMEM38BQ9NVV0 291 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 RPS6KA6Q9UK32 745 aa28.63■■■□□ 2.17
SSSCA1-205ENST00000527920 VSTM5A8MXK1 200 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 PIP5K1CO60331 668 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 QDPRP09417 244 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 OR8G3PP0DMU2 310 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 IFI30P13284 250 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 ZNF133P52736 654 aaPredicted RBP28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 CLRN1P58418 232 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms