RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RIF1Q5UIP0 2472 aaKnown RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 ARSBP15848 533 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ALDH3B2P48448 385 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ZNF117Q03924 483 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ZNF141Q15928 474 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 Q499Y3 187 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 SGCDQ92629 289 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 SLC35B4Q969S0 331 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 VSTM2LQ96N03 204 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 METTL8Q9H825 291 aaKnown RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 DNAJB12Q9NXW2 375 aaKnown RBP13.72□□□□□ -0.21
USP47-207ENST00000527733 ABRACLQ9P1F3 81 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 B3GNT3Q9Y2A9 372 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 ABCA7Q8IZY2 2146 aa13.72□□□□□ -0.21
USP47-207ENST00000527733 FAM230AA0A1W2PPH8 454 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 DMWDQ09019 674 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 C3P1Q6ZMU1 363 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 CLDN22Q8N7P3 220 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 BOLLQ8N9W6 283 aaKnown RBP13.71□□□□□ -0.21
USP47-207ENST00000527733 ABHD4Q8TB40 342 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 SAP25Q8TEE9 199 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 DMRTB1Q96MA1 342 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 OXGR1Q96P68 337 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 BEX2Q9BXY8 128 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 BEX1Q9HBH7 125 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 WASF3Q9UPY6 502 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 SDHBP21912 280 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 IL10RAQ13651 578 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 ALKBH1Q13686 389 aaKnown RBP13.71□□□□□ -0.21
USP47-207ENST00000527733 NANOGP1Q8N7R0 232 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 OIT3Q8WWZ8 545 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 C3orf49Q96BT1 292 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 ACTR6Q9GZN1 396 aa13.71□□□□□ -0.21
USP47-207ENST00000527733 SEC14L2O76054 403 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 SP9P0CG40 484 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 RFC3P40938 356 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 PSG6Q00889 435 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 NTRK2Q16620 822 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 C8orf82Q6P1X6 216 aaPredicted RBP13.71□□□□□ -0.22
USP47-207ENST00000527733 TMPRSS11FQ6ZWK6 438 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 ZNF501Q96CX3 271 aaPredicted RBP13.71□□□□□ -0.22
USP47-207ENST00000527733 GPR87Q9BY21 358 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 MYEF2Q9P2K5 600 aaKnown RBP13.71□□□□□ -0.22
USP47-207ENST00000527733 TCFL5Q9UL49 500 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 HMGA2P52926 109 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 FUT7Q11130 342 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 CACNG6Q9BXT2 260 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 POLE4Q9NR33 117 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 SLC22A11Q9NSA0 550 aa13.71□□□□□ -0.22
USP47-207ENST00000527733 TXNL4BQ9NX01 149 aaKnown RBP13.71□□□□□ -0.22
USP47-207ENST00000527733 SCN3AQ9NY46 2000 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 NOTOA8MTQ0 251 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 STOMP27105 288 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 UGT2B10P36537 528 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 MPEG1Q2M385 716 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ZNF585AQ6P3V2 769 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 CT55Q8WUE5 264 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 PHYHIPQ92561 330 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 DHRS1Q96LJ7 313 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 FAM173AQ9BQD7 235 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 CDCA4Q9BXL8 241 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 IL20Q9NYY1 176 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 SURF4O15260 269 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ABHD16AO95870 558 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 QDPRP09417 244 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ZNF35P13682 527 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 POU3F3P20264 500 aaPredicted RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 ARHGDIBP52566 201 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 FXYD6P3P58550 94 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 RPS18P62269 152 aaKnown RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 ECH1Q13011 328 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 GALEQ14376 348 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 P2RY14Q15391 338 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 OR1C1Q15619 314 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 NDUFA5Q16718 116 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 THEM4Q5T1C6 240 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 SLC25A25Q6KCM7 469 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 JMJD6Q6NYC1 403 aaPredicted RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 TMEM205Q6UW68 189 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 C16orf47Q6ZP98 133 aaPredicted RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 KCTD12Q96CX2 325 aaKnown RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 SYNPO2LQ9H987 977 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 MED29Q9NX70 200 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 CES1P1Q9UKY3 287 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ASXL3Q9C0F0 2248 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ZNF646O15015 1829 aaPredicted RBP13.7□□□□□ -0.22
USP47-207ENST00000527733 TCRBV16S1A1N1A0A5B0 115 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 PLSCR5A0PG75 271 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 GSTT2P0CG29 244 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 LIPAP38571 399 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 ATP1B3P54709 279 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 OR1J2Q8NGS2 313 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 MFSD8Q8NHS3 518 aa13.7□□□□□ -0.22
USP47-207ENST00000527733 PIGCQ92535 297 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms