RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 MAGEB5Q9BZ81 275 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 GLIS2Q9BZE0 524 aaPredicted RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 OR8D2Q9GZM6 311 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 WWTR1Q9GZV5 400 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 ZNF350Q9GZX5 532 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SLC25A31Q9H0C2 315 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PCBD2Q9H0N5 130 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TBC1D17Q9HA65 648 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 TPT1P8Q9HAU6 139 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PLEKHA2Q9HB19 425 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 CUTCQ9NTM9 273 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 POT1Q9NUX5 634 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 HAO2Q9NYQ3 351 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 SPG21Q9NZD8 308 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PTGFRNQ9P2B2 879 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 UPB1Q9UBR1 384 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 PITPNC1Q9UKF7 332 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 HDGFL3Q9Y3E1 203 aa5.32□□□□□ -1.56
CD44-225ENST00000527326 MTCL1Q9Y4B5 1905 aaKnown RBP5.32□□□□□ -1.56
CD44-225ENST00000527326 NRXN2Q9P2S2 1712 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 GREB1LQ9C091 1923 aaPredicted RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 DOCK5Q9H7D0 1870 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ANKRD20A5PA0PJZ0 165 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 UNC119BA6NIH7 251 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 CD8B2A6NJW9 211 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 FAM183AA6NL82 134 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 A6NNC1 897 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 MASP2O00187 686 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 NARSO43776 548 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST1H2BKO60814 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ECI2O75521 394 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 STK16O75716 305 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 PMS2P2O95744 297 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 JCHAINP01591 159 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TK1P04183 234 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ATP1B1P05026 303 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST1H2BJP06899 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 C8AP07357 584 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 CST2P09228 141 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 UCHL1P09936 223 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TMIGD3P0DMS9 266 aaPredicted RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 VSIG10L2P0DP72 767 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 LAMP1P11279 417 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HLA-GP17693 338 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST1H2BOP23527 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ITPKBP27987 946 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 CCND3P30281 292 aaPredicted RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST1H2BBP33778 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 IGFALSP35858 605 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ARR3P36575 388 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 RPL4P36578 427 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 RABIFP47224 123 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 CDKN2DP55273 166 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 CLDN12P56749 244 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST1H2BDP58876 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST1H2BCP62807 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 RANP62826 216 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 RPL19P84098 196 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 GINS1Q14691 196 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 MEF2DQ14814 521 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HERPUD1Q15011 391 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TCEA2Q15560 299 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST2H2BEQ16778 126 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ODF4Q2M2E3 257 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 LINC00303Q3SY05 128 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 CRY2Q49AN0 593 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 RNASE12Q5GAN4 147 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 ZNF667Q5HYK9 610 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 EOGTQ5NDL2 527 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 OR2G6Q5TZ20 316 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 KHDRBS2Q5VWX1 349 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 FAM219BQ5XKK7 198 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 WSCD1Q658N2 575 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TANGO2Q6ICL3 276 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 VWA1Q6PCB0 445 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 VHLLQ6RSH7 139 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 DHRS11Q6UWP2 260 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 PRSS57Q6UWY2 283 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 FAM83HQ6ZRV2 1179 aaPredicted RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 SLC24A5Q71RS6 500 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 GALNTL5Q7Z4T8 443 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TMEM183AQ8IXX5 376 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 NRSN1Q8IZ57 195 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 RYBPQ8N488 228 aaPredicted RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 NKAPQ8N5F7 415 aaKnown RBP5.31□□□□□ -1.56
CD44-225ENST00000527326 C11orf42Q8N5U0 333 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TOP6BLQ8N6T0 577 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TCEANCQ8N8B7 351 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ZNF485Q8NCK3 441 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 GMCL1P1Q8NEA9 526 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 BBS1Q8NFJ9 593 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 OR5AP2Q8NGF4 316 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 OR5L2Q8NGL0 311 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 OR5W2Q8NH69 310 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 OR2V1Q8NHB1 315 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 ZCCHC10Q8TBK6 192 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 EEF1AKMT1Q8WVE0 214 aa5.31□□□□□ -1.56
CD44-225ENST00000527326 TRAPPC12Q8WVT3 735 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms