RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 OSMP13725 252 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 APEHP13798 732 aaKnown RBP9.47□□□□□ -0.89
NEDD8-205ENST00000527046 PSMB1P20618 241 aaKnown RBP9.47□□□□□ -0.89
NEDD8-205ENST00000527046 COL8A1P27658 744 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 GIPRP48546 466 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 FAPQ12884 760 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 TAF11Q15544 211 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 ETFDHQ16134 617 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 SLC36A3Q495N2 470 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 CARD17Q5XLA6 110 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 SLC25A47Q6Q0C1 308 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 CASP12Q6UXS9 341 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 BEND4Q6ZU67 534 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 C10orf67Q8IYJ2 551 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 SVOPLQ8N434 492 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 LNX2Q8N448 690 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 WDR31Q8NA23 367 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 ICA1LQ8NDH6 482 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 ZNRF4Q8WWF5 429 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 NRG4Q8WWG1 115 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 ADAD1Q96M93 576 aaKnown RBP9.47□□□□□ -0.89
NEDD8-205ENST00000527046 CIB1Q99828 191 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 GPR35Q9HC97 309 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 USE1Q9NZ43 259 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 UGT2A1Q9Y4X1 527 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 A0A1W2PRG6 482 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF503-AS2A6NEH8 195 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 M0R3G1 203 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 CASQ2O14958 399 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 RRP9O43818 475 aaKnown RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 SLC43A1O75387 559 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 SLC2A10O95528 541 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 HIST1H1CP16403 213 aaKnown RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF23P17027 643 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 GSTM3P21266 225 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 SDHAP31040 664 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 UGT2B10P36537 528 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ACVR1BP36896 505 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 MYBPC1Q00872 1141 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 IL1RL1Q01638 556 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 FMODQ06828 376 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ITGADQ13349 1161 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 P2RY6Q15077 328 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 RCN1Q15293 331 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 GABRA6Q16445 453 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 CLEC12AQ5QGZ9 265 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 TMEM236Q5W0B7 351 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 SP5Q6BEB4 398 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF627Q7L945 461 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ZDHHC13Q8IUH4 622 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 PARP8Q8N3A8 854 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 CBR4Q8N4T8 237 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 IQCF1Q8N6M8 205 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 POMGNT2Q8NAT1 580 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 SYT14Q8NB59 555 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 NPEPL1Q8NDH3 523 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 BCL2L2Q92843 193 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 MCHR2Q969V1 340 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ERMAPQ96PL5 475 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 POLDIP3Q9BY77 421 aaKnown RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 GLTPQ9NZD2 209 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF224Q9NZL3 707 aa9.46□□□□□ -0.9
NEDD8-205ENST00000527046 STX18Q9P2W9 335 aaKnown RBP9.46□□□□□ -0.9
NEDD8-205ENST00000527046 TEX13CA0A0J9YWL9 993 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 SLC22A23A1A5C7 686 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 A1L4Q6 167 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 OR6C68A6NDL8 312 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF726A6NNF4 738 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 CENPBD1B2RD01 187 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 H7C1C5 153 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 EI24O14681 340 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ARHGEF9O43307 516 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 IDH3BO43837 385 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 LYZL6O75951 148 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 BAG2O95816 211 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 QDPRP09417 244 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 MPGP29372 298 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 SLC6A6P31641 620 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 RPL4P36578 427 aaKnown RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 DAP3P51398 398 aaKnown RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 CRISP1P54107 249 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 LCN6P62502 163 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ARF1P84077 181 aaKnown RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ROR2Q01974 943 aaKnown RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 TOP3AQ13472 1001 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 DAG1Q14118 895 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 GINS1Q14691 196 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 PTGES3Q15185 160 aaKnown RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 C10orf128Q5T292 105 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 C9orf135Q5VTT2 229 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 GPR139Q6DWJ6 353 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 FOXL2NBQ6ZUU3 175 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF771Q7L3S4 317 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 DMRTC2Q8IXT2 367 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ATG16L2Q8NAA4 619 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms