RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 C1orf61Q13536 156 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 EIF2B1Q14232 305 aaKnown RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 POU6F1Q14863 301 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 CHRNA6Q15825 494 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 MICAQ29983 383 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 DEFB133Q30KQ1 61 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 BEND6Q5SZJ8 279 aaPredicted RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 GPRC6AQ5T6X5 926 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 IL23RQ5VWK5 629 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 PDPK2PQ6A1A2 396 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 RAB12Q6IQ22 244 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 FAM151BQ6UXP7 276 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 C4orf22Q6V702 233 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ZNF600Q6ZNG1 722 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 P4HA3Q7Z4N8 544 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SH2D6Q7Z4S9 175 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SNX20Q7Z614 316 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 LINC00523Q86TU6 105 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SLC22A16Q86VW1 577 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 EID2Q8N6I1 236 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 CD177Q8N6Q3 437 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ZNF491Q8N8L2 437 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 DNAAF3Q8N9W5 541 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OR4K2Q8NGD2 314 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OR8H1Q8NGG4 311 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OR56A4Q8NGH8 313 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OR4C6Q8NH72 309 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 RFESDQ8TAC1 157 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 DTX3LQ8TDB6 740 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 VN1R17PQ8TDU5 208 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 LMX1AQ8TE12 382 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SETD7Q8WTS6 366 aaKnown RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 NAT14Q8WUY8 206 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 LRRC45Q96CN5 670 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 DNAJC1Q96KC8 554 aaKnown RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 VPS35Q96QK1 796 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OR2M4Q96R27 311 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 RANBP9Q96S59 729 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SH3GL3Q99963 347 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 TTYH2Q9BSA4 534 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ZSCAN5AQ9BUG6 496 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ST6GALNAC5Q9BVH7 336 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SPATA16Q9BXB7 569 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 CAPS2Q9BXY5 557 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 GSDMCQ9BYG8 508 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 IL26Q9NPH9 171 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 SMOXQ9NWM0 555 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ATXN10Q9UBB4 475 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 PCYOX1Q9UHG3 505 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 ZNF107Q9UII5 783 aaPredicted RBP2.97□□□□□ -1.93
CD44-219ENST00000525685 CRLS1Q9UJA2 301 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 VSIG4Q9Y279 399 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 U3KQA8 63 aa2.97□□□□□ -1.93
CD44-219ENST00000525685 OTOGLQ3ZCN5 2332 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 HEATR9A2RTY3 570 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 TMEM89A2RUT3 159 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 OR2AG2A6NM03 316 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 GPR89AB7ZAQ6 455 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 GOLGA8MH3BSY2 632 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 DNALI1O14645 258 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 PHOX2AO14813 284 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 CASQ2O14958 399 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 RAD51CO43502 376 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 UGT1A9O60656 530 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ZNF253O75346 499 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 BANF1O75531 89 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SRP72O76094 671 aaKnown RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 LDOC1O95751 146 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 IGKV3-15P01624 115 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 GPR89BP0CG08 455 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ALPPL2P10696 532 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MLNP12872 115 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 CTSEP14091 401 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 PGAM2P15259 253 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 IVDP26440 423 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 AK4P27144 223 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 UGT1A3P35503 534 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 UGT1A5P35504 534 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ACTR1BP42025 376 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MAGEA3P43357 314 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 CLDN6P56747 220 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ACTR1AP61163 376 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 CRADDP78560 199 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MRPS25P82663 173 aaKnown RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 DR1Q01658 176 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 CKAP4Q07065 602 aaKnown RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 LRRC74AQ0VAA2 488 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ELOCQ15369 112 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 PPP1R7Q15435 360 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 Q1RN00 199 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 C17orf58Q2M2W7 97 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 AGKQ53H12 422 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 PYCR3Q53H96 274 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 LDLRAP1Q5SW96 308 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 N4BP2L1Q5TBK1 243 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 OLFML2AQ68BL7 652 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 LRRC8BQ6P9F7 803 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 AFTPHQ6ULP2 937 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms