RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 CD180Q99467 661 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 C1QTNF2Q9BXJ5 285 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 ALX4Q9H161 411 aaPredicted RBP10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 GLIPR2Q9H4G4 154 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 FN3KRPQ9HA64 309 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 POLE3Q9NRF9 147 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 SIDT1Q9NXL6 827 aaKnown RBP10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 MTFP1Q9UDX5 166 aa10.29□□□□□ -0.76
CLNS1A-204ENST00000525428 COL6A3P12111 3177 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 FEZF1A0PJY2 475 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 UNC119BA6NIH7 251 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 TCAPO15273 167 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 CCL16O15467 120 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 FGF16O43320 207 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 COCHO43405 550 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 STC2O76061 302 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 ABLIM3O94929 683 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 CKMP06732 381 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 RBM34P42696 430 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 NDUFA6P56556 154 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 ZNF345Q14585 488 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 NKPD1Q17RQ9 610 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 ZNF836Q6ZNA1 936 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 FRRS1Q6ZNA5 592 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 MBOAT2Q6ZWT7 520 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 CCDC116Q8IYX3 515 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 SEMA6DQ8NFY4 1073 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 OR5M8Q8NGP6 311 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 RNASE11Q8TAA1 199 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 SECTM1Q8WVN6 248 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 POM121Q96HA1 1249 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 ELF4Q99607 663 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 EFCAB11Q9BUY7 163 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 SMOC1Q9H4F8 434 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 SFXN1Q9H9B4 322 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 A0A087X0M5 115 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 A0A1B0GX30 115 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 RIIAD1A6NNX1 92 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 NPC1O15118 1278 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 TMPRSS11DO60235 418 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 GLSO94925 669 aaPredicted RBP10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 FGF19O95750 216 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 ADH1AP07327 375 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 AKAIN1P0CW23 69 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 CD79AP11912 226 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 TPT1P13693 172 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 F3P13726 295 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 RBP2P50120 134 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 EPHB3P54753 998 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 LTBQ06643 244 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 TGM3Q08188 693 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 ILF3Q12906 894 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 NR0B2Q15466 257 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 LIPNQ5VXI9 398 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 STEAP1BQ6NZ63 245 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 TPRG1Q6ZUI0 275 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 OR4K14Q8NGD5 310 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 OR10D4PQ8NGN7 298 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 OR4C6Q8NH72 309 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 PIK3IP1Q96FE7 263 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 HS6ST2Q96MM7 605 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 SEMA6CQ9H3T2 930 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 KLHL42Q9P2K6 505 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 STEAP1Q9UHE8 339 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 WASF3Q9UPY6 502 aa10.28□□□□□ -0.76
CLNS1A-204ENST00000525428 A0A1B0GVT2 93 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 GXYLT2A0PJZ3 443 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 BHLHE40O14503 412 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 EMC8O43402 210 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 SLCO2B1O94956 709 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 IFNA2P01563 188 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 AMY2AP04746 511 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 RAB40ALP0C0E4 278 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 EPCAMP16422 314 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 VAMP1P23763 118 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 SERPINA4P29622 427 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 RAB5CP51148 216 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 NTHL1P78549 312 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 MRPS10P82664 201 aaKnown RBP10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 HGFACQ04756 655 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 GAMTQ14353 236 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 SURF2Q15527 256 aaPredicted RBP10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 AWAT1Q58HT5 328 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 RPL13AP3Q6NVV1 102 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 LCTLQ6UWM7 567 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 Q6ZVL8 140 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 TAF8Q7Z7C8 310 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 CBARPQ8N350 705 aaPredicted RBP10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 OR5T3Q8NGG3 340 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 RAB40AQ8WXH6 277 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 MIB2Q96AX9 1013 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 ZBTB8AQ96BR9 441 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 NRSN2Q9GZP1 204 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 ZNF350Q9GZX5 532 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 OPA3Q9H6K4 179 aa10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 USP36Q9P275 1121 aaKnown RBP10.27□□□□□ -0.76
CLNS1A-204ENST00000525428 KIF26AQ9ULI4 1882 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms