RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 JKAMPQ9P055 326 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 FRRS1LQ9P0K9 344 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 C6orf203Q9P0P8 240 aaPredicted RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 STX18Q9P2W9 335 aaKnown RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 GDF2Q9UK05 429 aaPredicted RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 MGAT4BQ9UQ53 548 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 RASD1Q9Y272 281 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 SLC5A6Q9Y289 635 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 B3GALT5Q9Y2C3 310 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 NOSIPQ9Y314 301 aaKnown RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 CORINQ9Y5Q5 1042 aa5.72□□□□□ -1.49
CD44-214ENST00000525211 UBR5O95071 2799 aaPredicted RBP5.72□□□□□ -1.49
CD44-214ENST00000525211 ADGRG4Q8IZF6 3080 aa5.71□□□□□ -1.49
CD44-214ENST00000525211 CACNA1CQ13936 2221 aa5.71□□□□□ -1.49
CD44-214ENST00000525211 SPTBN1Q01082 2364 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 TENM4Q6N022 2769 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 TEX13CA0A0J9YWL9 993 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ARRDC5A6NEK1 342 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 FAM171A2A8MVW0 826 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 A8MXE2 369 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 CASQ2O14958 399 aaPredicted RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 EIF1BO60739 113 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 SEC14L2O76054 403 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 NDUFB2O95178 105 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 MPZL1O95297 269 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 CLIC3O95833 236 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 IL18BPO95998 194 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ADAP00813 363 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 IGHMP01871 453 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 HIST1H2ABP04908 130 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 CD14P08571 375 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ITGA5P08648 1049 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 HOXD4P09016 255 aaPredicted RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 PGA4P0DJD7 388 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PGA3P0DJD8 388 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 FCGR1AP12314 374 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 OSMP13725 252 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ZNF43P17038 809 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 IGHV1-2P23083 117 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 COL8A1P27658 744 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 POU1F1P28069 291 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 CDAP32320 146 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 IFNA8P32881 189 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PTGER4P35408 488 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 OR3A2P47893 321 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PER3P56645 1201 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 RPL27P61353 136 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 CDK5Q00535 292 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 C1DQ13901 141 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 DAG1Q14118 895 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 GINS1Q14691 196 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PGGHGQ32M88 737 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 LCE2CQ5TA81 110 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 SMARCD3Q6STE5 483 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 B3GLCTQ6Y288 498 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 HIST3H2AQ7L7L0 130 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 RRM2BQ7LG56 351 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 AAED1Q7RTV5 226 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PXKQ7Z7A4 578 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 MRGPRGQ86SM5 289 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 HIPK1Q86Z02 1210 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ZDHHC13Q8IUH4 622 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 UEVLDQ8IX04 471 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 C20orf196Q8IYI0 205 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 C10orf67Q8IYJ2 551 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 SLC43A2Q8N370 569 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ARIH2OSQ8N7S6 290 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ATG16L2Q8NAA4 619 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 CYB561A3Q8NBI2 242 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 NPEPL1Q8NDH3 523 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 SDR9C7Q8NEX9 313 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 BBS1Q8NFJ9 593 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 OR4K13Q8NH42 304 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 LILRB4Q8NHJ6 448 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 MAGEE2Q8TD90 523 aaPredicted RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 STMN2Q93045 179 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 HIST1H2ACQ93077 130 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 TMEM54Q969K7 222 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 TMEM45BQ96B21 275 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ZHX1-C8orf76Q96EF9 292 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 ERMAPQ96PL5 475 aaPredicted RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 GPX7Q96SL4 187 aaPredicted RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 TM9SF2Q99805 663 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 BDH2Q9BUT1 245 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 SF3B5Q9BWJ5 86 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 MRPL13Q9BYD1 178 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 TXNIPQ9H3M7 391 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 NELFAQ9H3P2 528 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 TOR3AQ9H497 397 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 YY1AP1Q9H869 796 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 NOX3Q9HBY0 568 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 SRA1Q9HD15 236 aaKnown RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 TIGARQ9NQ88 270 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PLSCR4Q9NRQ2 329 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 PAQR5Q9NXK6 330 aaPredicted RBP5.71□□□□□ -1.5
CD44-214ENST00000525211 IL20Q9NYY1 176 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 USE1Q9NZ43 259 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 KLHL9Q9P2J3 617 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 TMEM5Q9Y2B1 443 aa5.71□□□□□ -1.5
CD44-214ENST00000525211 UGT2A1Q9Y4X1 527 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms