RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZNF566Q969W8 418 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 SGTBQ96EQ0 304 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 SLC25A44Q96H78 314 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-203ENST00000525013 FOXB1Q99853 325 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 CMTM6Q9NX76 183 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 B3GNT2Q9NY97 397 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 AP3M1Q9Y2T2 418 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 FKBP7Q9Y680 259 aa16.09■□□□□ 0.17
CAPN1-203ENST00000525013 PDE5AO76074 875 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 BCL10O95999 233 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 F12P00748 615 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-203ENST00000525013 FUT1P19526 365 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 THBS4P35443 961 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 PTDSS1P48651 473 aaKnown RBP16.08■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF627Q7L945 461 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 NUP37Q8NFH4 326 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 LZICQ8WZA0 190 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 SORCS2Q96PQ0 1159 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 NOX3Q9HBY0 568 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 GMPR2Q9P2T1 348 aaKnown RBP16.08■□□□□ 0.16
CAPN1-203ENST00000525013 MED31Q9Y3C7 131 aa16.08■□□□□ 0.16
CAPN1-203ENST00000525013 A0A1W2PRG6 482 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 MCIDASD6RGH6 385 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 GSTA4O15217 222 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 OR7A10O76100 309 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 RAB36O95755 333 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 F13BP05160 661 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 CSF3P09919 207 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 SLC25A16P16260 332 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 NPR2P20594 1047 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 IFNA8P32881 189 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 GIPRP48546 466 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 CLRN1P58418 232 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 SELENOWP63302 87 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 LIPEQ05469 1076 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 RPL18Q07020 188 aaKnown RBP16.07■□□□□ 0.16
CAPN1-203ENST00000525013 SNTB2Q13425 540 aaKnown RBP16.07■□□□□ 0.16
CAPN1-203ENST00000525013 DAG1Q14118 895 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 KRT80Q6KB66 452 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 LRFN4Q6PJG9 635 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 SLC15A3Q8IY34 581 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 MS4A3Q96HJ5 214 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 EFCAB1Q9HAE3 211 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 YAE1D1Q9NRH1 226 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 C20orf141Q9NUB4 165 aa16.07■□□□□ 0.16
CAPN1-203ENST00000525013 hCG_2039718K7EN88 272 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 GPRIN2O60269 458 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 UBL3O95164 117 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF682O95780 498 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 IGHG1P01857 330 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 QDPRP09417 244 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 THRBP10828 461 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 AQP2P41181 271 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 SLC7A2P52569 658 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 RAB1AP62820 205 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 EFNB3Q15768 340 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 CARTPTQ16568 116 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 PIWIL3Q7Z3Z3 882 aaKnown RBP16.06■□□□□ 0.16
CAPN1-203ENST00000525013 SPATA21Q7Z572 469 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 SKA3Q8IX90 412 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 SVOPLQ8N434 492 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 C10orf105Q8TEF2 133 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 PLK3Q9H4B4 646 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF442Q9H7R0 627 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF224Q9NZL3 707 aa16.06■□□□□ 0.16
CAPN1-203ENST00000525013 CXCR6O00574 342 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 DHHO43323 396 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 CD5LO43866 347 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 ENTPD5O75356 428 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 PATE4P0C8F1 98 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 PGA4P0DJD7 388 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 PGA3P0DJD8 388 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 OR8G3PP0DMU2 310 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 YAP1P46937 504 aaKnown RBP16.05■□□□□ 0.16
CAPN1-203ENST00000525013 PDLIM4P50479 330 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 ST3GAL3Q11203 375 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 VTCN1Q7Z7D3 282 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 TREML1Q86YW5 311 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 SLC22A24Q8N4F4 322 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 SYT14Q8NB59 555 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 TNFRSF13CQ96RJ3 184 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 HOPXQ9BPY8 73 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-203ENST00000525013 ELAC2Q9BQ52 826 aaKnown RBP16.05■□□□□ 0.16
CAPN1-203ENST00000525013 DENND2DQ9H6A0 471 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-203ENST00000525013 INIPQ9NRY2 104 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 TMEM38BQ9NVV0 291 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 SPEF1Q9Y4P9 236 aa16.05■□□□□ 0.16
CAPN1-203ENST00000525013 SH3PXD2BA1X283 911 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 NME4O00746 187 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 TLX2O43763 284 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-203ENST00000525013 PIP5K1CO60331 668 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 FARS2O95363 451 aaKnown RBP16.04■□□□□ 0.16
CAPN1-203ENST00000525013 IFNW1P05000 195 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 ZNF14P17017 642 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-203ENST00000525013 NR4A1P22736 598 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 NUDT2P50583 147 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 DAP3P51398 398 aaKnown RBP16.04■□□□□ 0.16
CAPN1-203ENST00000525013 MYBPC1Q00872 1141 aa16.04■□□□□ 0.16
CAPN1-203ENST00000525013 GALK2Q01415 458 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms