RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PPIL3Q9H2H8 161 aaKnown RBP5.7□□□□□ -1.5
NEDD8-203ENST00000524927 GOLPH3LQ9H4A5 285 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 ARHGAP32A7KAX9 2087 aa5.7□□□□□ -1.5
NEDD8-203ENST00000524927 FAM90A10PA6NDY2 464 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF487B1APH4 448 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 B4DXG7 233 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 CXCL13O43927 109 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 KERAO60938 352 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 FOXH1O75593 365 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 KDM4BO94953 1096 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 MELTFP08582 738 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 ADRA2AP08913 450 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 CCDC159P0C7I6 412 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 IGHV4-38-2P0DP08 117 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 TIA1P31483 386 aaKnown RBP eCLIP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 MTIF2P46199 727 aaKnown RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 SNRPEP62304 92 aaKnown RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 LCN2P80188 198 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 GPR157Q5UAW9 335 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 OR5M10Q6IEU7 315 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 OR7E24Q6IFN5 339 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 GDPGP1Q6ZNW5 385 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 LRRC6Q86X45 466 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 ST13P4Q8IZP2 240 aaPredicted RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 GCSAMQ8N6F7 178 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 PAPD5Q8NDF8 572 aaKnown RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 RBM15BQ8NDT2 890 aaKnown RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 OR5R1Q8NH85 324 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 THAP6Q8TBB0 222 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 ABHD3Q8WU67 409 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 TFB1MQ8WVM0 346 aaKnown RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 YIPF5Q969M3 257 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 ISOC1Q96CN7 298 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 PELOQ9BRX2 385 aaKnown RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 GANQ9H2C0 597 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF442Q9H7R0 627 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 HAO2Q9NYQ3 351 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 CRNNQ9UBG3 495 aaPredicted RBP5.69□□□□□ -1.5
NEDD8-203ENST00000524927 AMDHD2Q9Y303 409 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 PCNX3Q9H6A9 2034 aa5.69□□□□□ -1.5
NEDD8-203ENST00000524927 A0A1W2PR80 420 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 CIB4A0PJX0 185 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 BTNL10A8MVZ5 291 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 ERI3O43414 337 aaKnown RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 FGF17O60258 216 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 UGT2B11O75310 529 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 RP2O75695 350 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 F7P08709 466 aaPredicted RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 ACAA1P09110 424 aaPredicted RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF12P17014 697 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 NPR2P20594 1047 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 RPS3P23396 243 aaKnown RBP eCLIP5.68□□□□□ -1.52e-15■■■□□ 16.4
NEDD8-203ENST00000524927 CDH13P55290 713 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 RAB10P61026 200 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 SLC35A2P78381 396 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF155Q12901 538 aaPredicted RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 KCNJ11Q14654 390 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 KLHL38Q2WGJ6 581 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 AFTPHQ6ULP2 937 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 FRRS1Q6ZNA5 592 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 ZNF534Q76KX8 674 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 BZW1Q7L1Q6 419 aaKnown RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 LUZP1Q86V48 1076 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 COMTD1Q86VU5 262 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 KLHDC8AQ8IYD2 350 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 RNF113BQ8IZP6 322 aaKnown RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 FADS6Q8N9I5 356 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 OR5M1Q8NGP8 315 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 OR2V1Q8NHB1 315 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 CKAP2Q8WWK9 683 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 RIT1Q92963 219 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 MS4A6EQ96DS6 147 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 TRIM44Q96DX7 344 aaPredicted RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 OMA1Q96E52 524 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 MUS81Q96NY9 551 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 GPR61Q9BZJ8 451 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 GBA3Q9H227 469 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 P2RY12Q9H244 342 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 TPK1Q9H3S4 243 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 LYRM4Q9HD34 91 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 ZMAT5Q9UDW3 170 aaKnown RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 LEF1Q9UJU2 399 aaPredicted RBP5.68□□□□□ -1.5
NEDD8-203ENST00000524927 PDE10AQ9Y233 779 aa5.68□□□□□ -1.5
NEDD8-203ENST00000524927 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 A0A0G2JN53 185 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TMEM129A0AVI4 362 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 SH3PXD2BA1X283 911 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 CTAGE15A4D2H0 777 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 TMCO5BA8MYB1 307 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 ACOX3O15254 700 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 ZBTB14O43829 449 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 CRYAAP02489 173 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 S1PR1P21453 382 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 SSR1P43307 286 aaKnown RBP5.67□□□□□ -1.5
NEDD8-203ENST00000524927 MAGEA8P43361 318 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 RAD23AP54725 363 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 BPIFB3P59826 476 aa5.67□□□□□ -1.5
NEDD8-203ENST00000524927 POLR2FP61218 127 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms