RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 DDIASQ8IXT1 998 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 NOA1Q8NC60 698 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OR7A2PQ8NGA2 310 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OR52E4Q8NGH9 312 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OR5D16Q8NGK9 328 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OR2T11Q8NH01 316 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OR5W2Q8NH69 310 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OR5AK3PQ8NH89 298 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 OSR1Q8TAX0 266 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 AGR3Q8TD06 166 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF75CPQ92670 426 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 PROX1Q92786 737 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 APH1AQ96BI3 265 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 MSI2Q96DH6 328 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CCDC126Q96EE4 140 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF347Q96SE7 839 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 STACQ99469 402 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CCT7Q99832 543 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 PIMREGQ9BSJ6 248 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 INPP5KQ9BT40 448 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 TRMOQ9BU70 441 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 THUMPD3Q9BV44 507 aaKnown RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 HOXD1Q9GZZ0 328 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 PIGUQ9H490 435 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 FKRPQ9H9S5 495 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 SERINC1Q9NRX5 453 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 SIRT3Q9NTG7 399 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 ACSS1Q9NUB1 689 aaPredicted RBP4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 TMEM160Q9NX00 188 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 EMC3Q9P0I2 261 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 GIMAP2Q9UG22 337 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 DCDC2Q9UHG0 476 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 EMCNQ9ULC0 261 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 CCL27Q9Y4X3 112 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 SLC25A15Q9Y619 301 aa4.57□□□□□ -1.68
CTNNA1-239ENST00000523685 FREM1Q5H8C1 2179 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 IGHV4-61A0A0C4DH41 118 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 A0A1W2PPM1 405 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SERINC4A6NH21 518 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SMIM23A6NLE4 172 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 ATP6V1G2-DDX39BF2Z307 99 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 H7C417 338 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 KLF11O14901 512 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 AZIN1O14977 448 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SCAMP2O15127 329 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 EIF4E2O60573 245 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 GLRA3O75311 464 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 MRPL33O75394 65 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 PGM3O95394 542 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 C6orf47O95873 294 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CSTAP01040 98 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 KRT16P08779 473 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CSF3P09919 207 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 LAMP1P11279 417 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 BCKDHAP12694 445 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CPA3P15088 417 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 HOXB9P17482 250 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 DDX5P17844 614 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 PGCP20142 388 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 PRPH2P23942 346 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SRP14P37108 136 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 FRKP42685 505 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 ASMTP46597 345 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 OR2B6P58173 313 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CSNK2A1P68400 391 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 RUNX1T1Q06455 604 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 PDE7AQ13946 482 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 GABRA6Q16445 453 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SYT14P1Q58G82 188 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF544Q6NX49 715 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CASP12Q6UXS9 341 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 TMPPEQ6ZT21 453 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SSX8Q7RTT4 187 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SLC46A3Q7Z3Q1 461 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 R3HCC1LQ7Z5L2 792 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 SPATA19Q7Z5L4 167 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 HMGN2P46Q86SG4 172 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 LCA5Q86VQ0 697 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CLEC4FQ8N1N0 589 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 KIF18AQ8NI77 898 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 ZNF563Q8TA94 476 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 ACMSDQ8TDX5 336 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 TMEM234Q8WY98 164 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 OR5P2Q8WZ92 322 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 DPF1Q92782 380 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 ZHX1-C8orf76Q96EF9 292 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 FOXN4Q96NZ1 517 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 OR7D2Q96RA2 312 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 C1orf50Q9BV19 199 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 OR11A1Q9GZK7 315 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 TUBB1Q9H4B7 451 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 CTPS2Q9NRF8 586 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 THAP1Q9NVV9 213 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 TAS2R16Q9NYV7 291 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 PSMC3IPQ9P2W1 217 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 UPB1Q9UBR1 384 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 MKLN1Q9UL63 735 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 MOKQ9UQ07 419 aa4.56□□□□□ -1.68
CTNNA1-239ENST00000523685 FKBP7Q9Y680 259 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms