RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 LSSP48449 732 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 RRADP55042 308 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 GRK1Q15835 563 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 PRTGQ2VWP7 1150 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR5D18Q8NGL1 313 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 TM9SF4Q92544 642 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 TOMM40LQ969M1 308 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 MRI1Q9BV20 369 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 LOC102725191A0A1B0GVB3 256 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 FRG2CA6NGY1 282 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ARPC1BO15143 372 aaKnown RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 PAHP00439 452 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 MT-ND4P03905 459 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 HLA-DMAP28067 261 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SF3B4Q15427 424 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF628Q5EBL2 1059 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 IL17RDQ8NFM7 739 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 PIGCQ92535 297 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 MED29Q9NX70 200 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 KCNS2Q9ULS6 477 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 RCE1Q9Y256 329 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 NOSIPQ9Y314 301 aaKnown RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ARRDC5A6NEK1 342 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 EEF1E1-BLOC1S5C9J1V9 151 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 LIPCP11150 499 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 MPLP40238 635 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC16A9Q7RTY1 509 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF454Q8N9F8 522 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ST6GALNAC5Q9BVH7 336 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC6A15Q9H2J7 730 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 HIF3AQ9Y2N7 669 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF736B4DX44 427 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 M0R233 179 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 IGHV4-34P06331 123 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 DBHP09172 617 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 FASLGP48023 281 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 EIF5AP63241 154 aaKnown RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC35D3Q5M8T2 416 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 STEAP3Q658P3 488 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 C16orf47Q6ZP98 133 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC43A2Q8N370 569 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 ARIH2OSQ8N7S6 290 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 BEST4Q8NFU0 473 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR2T35Q8NGX2 323 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC25A43Q8WUT9 341 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SLC25A19Q9HC21 320 aa11.94□□□□□ -0.5
PCDHGB1-201ENST00000523390 SHISA7A6NL88 538 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF35P13682 527 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 GABRR1P24046 479 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 SDHAP31040 664 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 MTNR1BP49286 362 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 HNRNPFP52597 415 aaKnown RBP11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 CASP6P55212 293 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 SNRPD2P62316 118 aaKnown RBP11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 HSF1Q00613 529 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ARHGDIGQ99819 225 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 PLEKHJ1Q9NW61 149 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 OSGIN1Q9UJX0 560 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 SURF4O15260 269 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 HYAL3O43820 417 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 SERPINA2P20848 420 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 GALEQ14376 348 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 PRICKLE4Q2TBC4 344 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 MNTQ99583 582 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 GALNT9Q9HCQ5 603 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 CHST11Q9NPF2 352 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 TMEM9BQ9NQ34 198 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 SULT1C4O75897 302 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ABOP16442 354 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 SOX18P35713 384 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 RFC3P40938 356 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 PCBP3P57721 371 aaKnown RBP11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 RAB2AP61019 212 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 MFAP5Q13361 173 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 USP51Q70EK9 711 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR1N1Q8NGS0 311 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 APMAPQ9HDC9 416 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 R4GN57 208 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ANKRD61A6NGH8 418 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 ARGFXA6NJG6 315 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 C1QCP02747 245 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 DIO1P49895 249 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 PCBD1P61457 104 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 CORO6Q6QEF8 472 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 HSD17B8Q92506 261 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 DCBLD2Q96PD2 775 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 FKRPQ9H9S5 495 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 EMC7Q9NPA0 242 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 OR2S2Q9NQN1 319 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 FKBP14Q9NWM8 211 aa11.93□□□□□ -0.5
PCDHGB1-201ENST00000523390 TRPM7Q96QT4 1865 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms