RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 PCBP3P57721 371 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 SRSF2Q01130 221 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 NPRL3Q12980 569 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 BNIP1Q12981 228 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 SNTB2Q13425 540 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 SCARB2Q14108 478 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 DAG1Q14118 895 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 HACD2Q6Y1H2 254 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 KRT73Q86Y46 540 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 HPS1Q92902 700 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 CGREF1Q99674 301 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 TMEM43Q9BTV4 400 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 MED29Q9NX70 200 aa12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.13□□□□□ -0.47
HMBOX1-209ENST00000522468 PLPP3O14495 311 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 MFN2O95140 757 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 LYPD3O95274 346 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 EVX1P49640 407 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 PUDPQ08623 228 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 GSG1Q2KHT4 349 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 CR1LQ2VPA4 569 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 IQCCQ4KMZ1 466 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 RUNDC3AQ59EK9 446 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 PXKQ7Z7A4 578 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 PTOV1Q86YD1 416 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 BHLHE22Q8NFJ8 381 aaPredicted RBP12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 MRPL24Q96A35 216 aaKnown RBP12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 EPYCQ99645 322 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 HOPXQ9BPY8 73 aaPredicted RBP12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 CPPED1Q9BRF8 314 aaPredicted RBP12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 C19orf24Q9BVV8 132 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 MRPL37Q9BZE1 423 aaKnown RBP12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 NDE1Q9NXR1 346 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 NOX1Q9Y5S8 564 aa12.12□□□□□ -0.47
HMBOX1-209ENST00000522468 PRORSD1PA6NEY8 169 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 EVPLLA8MZ36 301 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 FXYD1O00168 92 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 FMO6PO60774 539 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 THY1P04216 161 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 ADRA2AP08913 450 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 B4GALT1P15291 398 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 NQO1P15559 274 aaKnown RBP12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 SLC6A2P23975 617 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 AQP1P29972 269 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 GLRXP35754 106 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 CAPZA2P47755 286 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 RASSF2P50749 326 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 CHN2P52757 468 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 PSME3P61289 254 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 CAMK2DQ13557 499 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 TRIP10Q15642 601 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 NPTX1Q15818 432 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 FXNQ16595 210 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 DUSP7Q16829 419 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 NANOGP8Q6NSW7 305 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 ZNF813Q6ZN06 617 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 RINLQ6ZS11 566 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 TSPYL5Q86VY4 417 aaPredicted RBP12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 ARMC8Q8IUR7 673 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 ZNF584Q8IVC4 421 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 RBM15BQ8NDT2 890 aaKnown RBP12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 HIPK4Q8NE63 616 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 UBASH3BQ8TF42 649 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 ARHGDIGQ99819 225 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 SH3GL1Q99961 368 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 DENND2DQ9H6A0 471 aaPredicted RBP12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 NANOGQ9H9S0 305 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 TMEM27Q9HBJ8 222 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 CORO2BQ9UQ03 480 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 CMAHPQ9Y471 501 aa12.11□□□□□ -0.47
HMBOX1-209ENST00000522468 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 VSTM5A8MXK1 200 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 LYNX1G3V0Z9 82 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 SYNGR3O43761 229 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 SERPINB7O75635 380 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 MT-ATP6P00846 226 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 LYNX1P0DP58 116 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 HNF1AP20823 631 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 CDH15P55291 814 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 NCALDP61601 193 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 IL1RL1Q01638 556 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 PIGFQ07326 219 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 PMS2P3Q13401 168 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 ZSCAN26Q16670 478 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 ZNF613Q6PF04 617 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 ARPINQ7Z6K5 226 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 SMYD1Q8NB12 490 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 GPR32P1Q8NGA4 272 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 FGFBP3Q8TAT2 258 aa12.1□□□□□ -0.47
HMBOX1-209ENST00000522468 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms