RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CMC2Q9NRP2 79 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 PTRH2Q9Y3E5 179 aaKnown RBP12.71□□□□□ -0.37
SYNPO-205ENST00000522122 ZSWIM8A7E2V4 1837 aa12.71□□□□□ -0.37
SYNPO-205ENST00000522122 PRRT4C9JH25 899 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 FCMRO60667 390 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 LBX1P52954 281 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 SLC9A3R2Q15599 337 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 ARHGAP11BQ3KRB8 267 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 PRSS45Q7RTY3 260 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 MAP3K3Q99759 626 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 ULBP2Q9BZM5 246 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 V9GYH0 126 aa12.71□□□□□ -0.38
SYNPO-205ENST00000522122 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 EEF1A1P68104 462 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 RNLSQ5VYX0 342 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TMEM99Q8N816 258 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 FAM3DQ96BQ1 224 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 OBP2AQ9NY56 170 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TMED7Q9Y3B3 224 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 CHRM4P08173 479 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 OPN5Q6U736 354 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 OR56B1Q8NGI3 324 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SMIM3Q9BZL3 60 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 C20orf85Q9H1P6 137 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TSPAN10Q9H1Z9 355 aaPredicted RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 OR52A5Q9H2C5 316 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 STEAP1Q9UHE8 339 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 ZFC3H1O60293 1989 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 LOC102725191A0A1B0GVB3 256 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SELENOFO60613 162 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SNAPINO95295 136 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 PDGFAP04085 211 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TAS2R46P59540 309 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 ACTBL2Q562R1 376 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 FAM174AQ8TBP5 190 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SELENOIQ9C0D9 397 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 IL21Q9HBE4 155 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SPHK1Q9NYA1 384 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SOD1P00441 154 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 S100A11P31949 105 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SRP9P49458 86 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 EIF2S3LQ2VIR3 472 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TMEM176BQ3YBM2 270 aaPredicted RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 LAIR2Q6ISS4 152 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 ANGPTL6Q8NI99 470 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 NANOS1Q8WY41 292 aaKnown RBP12.7□□□□□ -0.38
SYNPO-205ENST00000522122 WDR34Q96EX3 536 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 TBC1D29Q9UFV1 150 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 EMC9Q9Y3B6 208 aa12.7□□□□□ -0.38
SYNPO-205ENST00000522122 SURF4O15260 269 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 DBHP09172 617 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 RAC2P15153 192 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 EXOSC6Q5RKV6 272 aaKnown RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 LIPNQ5VXI9 398 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 ADGRF3Q8IZF5 1079 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 OR1S1Q8NH92 325 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 KCNG3Q8TAE7 436 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 RNF128Q8TEB7 428 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 TNFRSF10CO14798 259 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 FADS1O60427 444 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 SLC2A10O95528 541 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 CD53P19397 219 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 FOLR3P41439 243 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 LUMP51884 338 aaPredicted RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 EFNA3P52797 238 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 PCBP3P57721 371 aaKnown RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 C1QTNF12Q5T7M4 302 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 OVCH1Q7RTY7 1134 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 ASB16Q96NS5 453 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 ELF4Q99607 663 aaPredicted RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 MICU1Q9BPX6 476 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 SEC22CQ9BRL7 303 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 LRFN1Q9P244 771 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 DHCR7Q9UBM7 475 aaKnown RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 A4GNTQ9UNA3 340 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 NTNG1Q9Y2I2 539 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 MMACHCQ9Y4U1 282 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 GLYATL3Q5SZD4 288 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 PPP1R3BQ86XI6 285 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 CCDC71Q8IV32 467 aaPredicted RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 SVBPQ8N300 66 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 VN1R2Q8NFZ6 395 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 OR6M1Q8NGM8 313 aa12.69□□□□□ -0.38
SYNPO-205ENST00000522122 DCLRE1CQ96SD1 692 aaKnown RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
SYNPO-205ENST00000522122 CDH20Q9HBT6 801 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms