RNA–Protein interactions for RNA: ENST00000521767.1

UBR5-211, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-211	ENST00000521767	ENPP1	P22413	925 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	PSMB9	P28065	219 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	EIF1AX	P47813	144 aa	Known RBP	11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	BID	P55957	195 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	PMP22	Q01453	160 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	GGTLC2	Q14390	218 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	BCL2A1	Q16548	175 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	LINC01590	Q5TEZ4	76 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	EEF1A1P5	Q5VTE0	462 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	LRRC69	Q6ZNQ3	347 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	LHFPL3	Q86UP9	236 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	WDFY1	Q8IWB7	410 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	ACBD7	Q8N6N7	88 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	OR6K6	Q8NGW6	343 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	FAM122A	Q96E09	287 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	ALG12	Q9BV10	488 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	MND1	Q9BWT6	205 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	JAM3	Q9BX67	310 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	RBM38	Q9H0Z9	239 aa	Known RBP	11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	LDAH	Q9H6V9	325 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	KLHL13	Q9P2N7	655 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	FKBP7	Q9Y680	259 aa		11.97	□□□□□ -0.49
UBR5-211	ENST00000521767	ATM	Q13315	3056 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	MKRN2OS	H3BPM6	223 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	SMAD9	O15198	467 aa	Known RBP	11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	AHCYL1	O43865	530 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	TRMU	O75648	421 aa	Known RBP	11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	ACTL6A	O96019	429 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	MRPL3	P09001	348 aa	Known RBP	11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	LIMS3	P0CW19	117 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	LIMS4	P0CW20	117 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	CLDN18	P56856	261 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	ZNF169	Q14929	603 aa	Predicted RBP	11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	POU4F3	Q15319	338 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	MED22	Q15528	200 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	ZNF367	Q7RTV3	350 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	ZBTB46	Q86UZ6	589 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	POMGNT2	Q8NAT1	580 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	SYT14	Q8NB59	555 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	NEIL3	Q8TAT5	605 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	COG8	Q96MW5	612 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	OR5M11	Q96RB7	305 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	KCNK17	Q96T54	332 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	ZNF649	Q9BS31	505 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	EMC6	Q9BV81	110 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	RERGL	Q9H628	205 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	B9D1	Q9UPM9	204 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	RAX	Q9Y2V3	346 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	LSM2	Q9Y333	95 aa	Known RBP	11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	PCDHGB7	Q9Y5F8	929 aa		11.96	□□□□□ -0.49
UBR5-211	ENST00000521767	TRGV5	A0A0B4J1U4	118 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	TMEM129	A0AVI4	362 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SLC35F4	A4IF30	521 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	CCDC160	A6NGH7	325 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	C12orf71	A8MTZ7	269 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	TFEC	O14948	347 aa	Predicted RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	MYL12B	O14950	172 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SLC16A7	O60669	478 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	PDGFA	P04085	211 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	ZNF708	P17019	499 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SRY	Q05066	204 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SLC17A1	Q14916	467 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SPHAR	Q15513	63 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	TIGD6	Q17RP2	521 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	GPR107	Q5VW38	600 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	VASN	Q6EMK4	673 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	CREB3L2	Q70SY1	520 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	HDDC2	Q7Z4H3	204 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	MEIOB	Q8N635	442 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	ZNF511	Q8NB15	262 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	OR10H4	Q8NGA5	316 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	OR9K2	Q8NGE7	335 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	OR6X1	Q8NH79	312 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	CNN2	Q99439	309 aa	Known RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SF3B5	Q9BWJ5	86 aa	Known RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	MRPL13	Q9BYD1	178 aa	Known RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	EXO5	Q9H790	373 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	INPP5E	Q9NRR6	644 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	ERVK13-1	Q9NX77	482 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	LIPG	Q9Y5X9	500 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	DAPL1	A0PJW8	107 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	ZNF24	P17028	368 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	CRABP1	P29762	137 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	UCN	P55089	124 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	TMPRSS3	P57727	454 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	TBR1	Q16650	682 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767		Q6ZS92	163 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SMAP2	Q8WU79	429 aa	Predicted RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	ROBO4	Q8WZ75	1007 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	CPNE4	Q96A23	557 aa	Predicted RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	SLC25A44	Q96H78	314 aa	Predicted RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	ADAD1	Q96M93	576 aa	Known RBP	11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	MGLL	Q99685	303 aa		11.95	□□□□□ -0.5
UBR5-211	ENST00000521767	PHF3	Q92576	2039 aa	Known RBP	11.94	□□□□□ -0.5
UBR5-211	ENST00000521767	PTPRQ	Q9UMZ3	2332 aa		11.94	□□□□□ -0.5
UBR5-211	ENST00000521767	IGLV1-36	A0A0B4J1U3	117 aa		11.94	□□□□□ -0.5
UBR5-211	ENST00000521767	ZNF726	A6NNF4	738 aa		11.94	□□□□□ -0.5
UBR5-211	ENST00000521767	NPIPA2	E9PIF3	369 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms