RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 MAGEE2Q8TD90 523 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 GIPC3Q8TF64 312 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 TSPAN32Q96QS1 320 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 KATNB1Q9BVA0 655 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 POLDIP3Q9BY77 421 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 ULBP2Q9BZM5 246 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 CRLF2Q9HC73 371 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 NRIP3Q9NQ35 241 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 GLTPQ9NZD2 209 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 ZNF346Q9UL40 294 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 AP4S1Q9Y587 144 aa12.11□□□□□ -0.47
CTNNA1-226ENST00000521368 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ZNF99A8MXY4 864 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 E2F6O75461 281 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 TRMUO75648 421 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 TIPRLO75663 272 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 GASTP01350 101 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 GSTM3P21266 225 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 PAX7P23759 505 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 HOXC12P31275 282 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 CLRN1P58418 232 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 RUNX1T1Q06455 604 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 PPP1R8Q12972 351 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ATP6AP1Q15904 470 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 RFX4Q33E94 735 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 CD300LDQ6UXZ3 194 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ZNF620Q6ZNG0 422 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 FAM122BQ7Z309 247 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 IGFN1Q86VF2 1251 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ARIH2OSQ8N7S6 290 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 AQP11Q8NBQ7 271 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 OR10G2Q8NGC3 310 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ZNF519Q8TB69 540 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 FANK1Q8TC84 345 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 MUCL1Q96DR8 90 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 NRBF2Q96F24 287 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 ALG12Q9BV10 488 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 OR52D1Q9H346 318 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 SMURF2Q9HAU4 748 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 GRHPRQ9UBQ7 328 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 AMDHD2Q9Y303 409 aa12.1□□□□□ -0.47
CTNNA1-226ENST00000521368 AHCYL1O43865 530 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 TXNDC12O95881 172 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 FASP25445 335 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 SDHAP31040 664 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 SLC6A6P31641 620 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 IST1P53990 364 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ERVK-25P63136 954 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 TLE4Q04727 773 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 COX10Q12887 443 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 TOP3AQ13472 1001 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 KPNB1Q14974 876 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 PPA1Q15181 289 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ZFP1Q6P2D0 407 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 SEZ6L2Q6UXD5 910 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 RASSF6Q6ZTQ3 369 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 CCDC36Q8IYA8 594 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 HDAC2Q92769 488 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 BCL2L2Q92843 193 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ZC3HAV1LQ96H79 300 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 FEVQ99581 238 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 BDH2Q9BUT1 245 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 MOV10Q9HCE1 1003 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 SLC17A5Q9NRA2 495 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 IL20Q9NYY1 176 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ADAM18Q9Y3Q7 739 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 MAGED1Q9Y5V3 778 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 CDH10Q9Y6N8 788 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ANKHD1Q8IWZ3 2542 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 DCHS2Q6V1P9 2916 aa12.09□□□□□ -0.47
CTNNA1-226ENST00000521368 ARPC4-TTLL3A0A0A6YYG9 625 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 XKRYO14609 159 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 IMPA2O14732 288 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 ARPC3O15145 178 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 DHHO43323 396 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 ENTPD5O75356 428 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 CTAG2O75638 210 aa12.08□□□□□ -0.48
CTNNA1-226ENST00000521368 QDPRP09417 244 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms