RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 YIPF5Q969M3 257 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 ZNF607Q96SK3 696 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 TMEM43Q9BTV4 400 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 RP2O75695 350 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 NCR1O76036 304 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 PNPP00491 289 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 MT-ATP6P00846 226 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 NAT2P11245 290 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 AHCYP23526 432 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 LMO4P61968 165 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 RAB39AQ14964 217 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 MGAM2Q2M2H8 2515 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 LRIF1Q5T3J3 769 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-204ENST00000521331 FAHD2BQ6P2I3 314 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-204ENST00000521331 MAVSQ7Z434 540 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 RANBP3LQ86VV4 465 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-204ENST00000521331 OR5J2Q8NH18 312 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 FAM216AQ8WUB2 273 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 FAHD2AQ96GK7 314 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 MOGAT1Q96PD6 335 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 FZR1Q9UM11 496 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 PCDHB10Q9UN67 800 aa12.75□□□□□ -0.37
PRKDC-204ENST00000521331 TRIM77I1YAP6 450 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 WNT9BO14905 357 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 TPST1O60507 370 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SERPINB7O75635 380 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SERPINI2O75830 405 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 OR8G3PP0DMU2 310 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SLC6A2P23975 617 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 MRPL19P49406 292 aaKnown RBP12.74□□□□□ -0.37
PRKDC-204ENST00000521331 CDH12P55289 794 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 BIDP55957 195 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 HILS1P60008 231 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 STX1BP61266 288 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 ACSM5Q6NUN0 579 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 DPPA2Q7Z7J5 298 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 ZNF584Q8IVC4 421 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SLC22A24Q8N4F4 322 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 OR6X1Q8NH79 312 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SGMS2Q8NHU3 365 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SNX33Q8WV41 574 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 GCDHQ92947 438 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-204ENST00000521331 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 RBM4Q9BWF3 364 aaKnown RBP12.74□□□□□ -0.37
PRKDC-204ENST00000521331 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 C1orf198Q9H425 327 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SLC52A3Q9NQ40 469 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 HINT3Q9NQE9 182 aaKnown RBP12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SLCO1C1Q9NYB5 712 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 SLC25A37Q9NYZ2 338 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 GLTPQ9NZD2 209 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 CORO2BQ9UQ03 480 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 GMEB1Q9Y692 573 aa12.74□□□□□ -0.37
PRKDC-204ENST00000521331 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 C17orf100A8MU93 164 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 LRRN3E7EW58 273 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 FMO6PO60774 539 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 OR6A2O95222 327 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 FARS2O95363 451 aaKnown RBP12.73□□□□□ -0.37
PRKDC-204ENST00000521331 ADORA3P0DMS8 318 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 EPHA1P21709 976 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 SLC18A1P54219 525 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-204ENST00000521331 TEKQ02763 1124 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 SCARB2Q14108 478 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 ARMC8Q8IUR7 673 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 MSRB3Q8IXL7 192 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 RAB39BQ96DA2 213 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 G6PC2Q9NQR9 355 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
PRKDC-204ENST00000521331 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRKDC-204ENST00000521331 V9GYY5 206 aaPredicted RBP12.73□□□□□ -0.37
PRKDC-204ENST00000521331 IGLV3-9A0A075B6K5 115 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 A0A0G2JMP0 313 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 A0A0X1KG70 313 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 TPST2O60704 377 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 PTHP01270 115 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 PATE4P0C8F1 98 aa12.72□□□□□ -0.37
PRKDC-204ENST00000521331 ZNF250P15622 560 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms