RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 SNHG28P0DPA3 235 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 HPGDP15428 266 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 PSMC3P17980 439 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 CXCR2P25025 360 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 OR1E1P30953 314 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 CSNK1A1P48729 337 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 LMO4P61968 165 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 CCDC173Q0VFZ6 552 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 PSMD5Q16401 504 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 CNIH2Q6PI25 160 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 C12orf54Q6X4T0 127 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 ZNF621Q6ZSS3 439 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 STXBP4Q6ZWJ1 553 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 COPS6Q7L5N1 327 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 TIPARPQ7Z3E1 657 aaKnown RBP2.88□□□□□ -1.95
SREK1-208ENST00000520580 HDDC2Q7Z4H3 204 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 SNX20Q7Z614 316 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 LHFPL3Q86UP9 236 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 PLA2G4DQ86XP0 818 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 KLHDC8BQ8IXV7 354 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 PDIK1LQ8N165 341 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 KIF2BQ8N4N8 673 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 OR5K2Q8NHB8 316 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 BAALCQ8WXS3 180 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 FAM131CQ96AQ9 280 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 ART5Q96L15 291 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 PGLYRP2Q96PD5 576 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 TRNT1Q96Q11 434 aaKnown RBP2.88□□□□□ -1.95
SREK1-208ENST00000520580 NDEL1Q9GZM8 345 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 GOLPH3Q9H4A6 298 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 JPT2Q9H910 190 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 FOLH1BQ9HBA9 442 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 LY9Q9HBG7 655 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 CSNK1G1Q9HCP0 422 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 DMAP1Q9NPF5 467 aaPredicted RBP2.88□□□□□ -1.95
SREK1-208ENST00000520580 TREM2Q9NZC2 230 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 KCNIP1Q9NZI2 227 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 RCL1Q9Y2P8 373 aaKnown RBP2.88□□□□□ -1.95
SREK1-208ENST00000520580 V9GY05 133 aa2.88□□□□□ -1.95
SREK1-208ENST00000520580 THOC2Q8NI27 1593 aaKnown RBP2.88□□□□□ -1.95
SREK1-208ENST00000520580 A0A1W2PRD5 423 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 A8MX80 341 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 B4DXG7 233 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 FAM72CH0Y354 149 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 DYNC1I1O14576 645 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 CLDN11O75508 207 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 C2P06681 752 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ZNF250P15622 560 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 KLK7P49862 253 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 EFNA3P52797 238 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 PSMC5P62195 406 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 RPL36AP83881 106 aaKnown RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 PAX2Q02962 417 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ACVR1Q04771 509 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 CHRNB3Q05901 458 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 LRRC63Q05C16 580 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 STX3Q13277 289 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 KCTD19Q17RG1 926 aaPredicted RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 FAM72AQ5TYM5 149 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 FAM72DQ6L9T8 149 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 FRA10AC1Q70Z53 315 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ZNF546Q86UE3 836 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 FAM72BQ86X60 149 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 APRG1Q8IVJ8 170 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 RDH10Q8IZV5 341 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 C4orf32Q8N8J7 132 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ANGPTL6Q8NI99 470 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 EEF1AKMT3Q96AZ1 226 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 C9orf72Q96LT7 481 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 CYTH2Q99418 400 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ATF6BQ99941 703 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 SH3GL1Q99961 368 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 SRXN1Q9BYN0 137 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 NXF3Q9H4D5 531 aaKnown RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 RANBP3Q9H6Z4 567 aaPredicted RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 ANKHQ9HCJ1 492 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 IMPAD1Q9NX62 359 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 CCDC59Q9P031 241 aaKnown RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 ING4Q9UNL4 249 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 RLFQ13129 1914 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 IGLV7-46A0A075B6I9 117 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 CENPXA8MT69 81 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 K7ENP7 123 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 SLC17A2O00624 439 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 SC5DO75845 299 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 UGT1A3P35503 534 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 SERPINB8P50452 374 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 HNRNPA3P51991 378 aaKnown RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 SKP1P63208 163 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 BCL2L1Q07817 233 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 TRAM2Q15035 370 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 SF3A2Q15428 464 aaKnown RBP2.87□□□□□ -1.95
SREK1-208ENST00000520580 ZNF506Q5JVG8 444 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ZNF470Q6ECI4 717 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ADNP2Q6IQ32 1131 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ARCQ7LC44 396 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 BHLHA9Q7RTU4 235 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 LRRC49Q8IUZ0 686 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 NAXDQ8IW45 347 aa2.87□□□□□ -1.95
SREK1-208ENST00000520580 ZFP41Q8N8Y5 198 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms