RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 KRT75O95678 551 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 PRG2P13727 222 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 NQO1P15559 274 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 GRPRP30550 384 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 LCN2P80188 198 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 RBBP4Q09028 425 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 RAB39AQ14964 217 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 CARD17Q5XLA6 110 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 C6orf89Q6UWU4 347 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 USP51Q70EK9 711 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 PIWIL3Q7Z3Z3 882 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 SERPINA11Q86U17 422 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 ZNF584Q8IVC4 421 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 CPEB3Q8NE35 698 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 SLC30A7Q8NEW0 376 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 OR6N1Q8NGY5 312 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 ZNF519Q8TB69 540 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 C11orf40Q8WZ69 217 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 C1orf147Q96MC9 270 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 SPATA9Q9BWV2 254 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 C1QTNF5Q9BXJ0 243 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 BCL2L14Q9BZR8 327 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 RPS6KB2Q9UBS0 482 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 LGALS13Q9UHV8 139 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 MMP24Q9Y5R2 645 aa9.74□□□□□ -0.85
TRAPPC9-203ENST00000517667 TRAV36DV7A0A075B6V5 113 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 ISPDA4D126 451 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 TMEM247A6NEH6 219 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 ZNF726A6NNF4 738 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 POLR3GO15318 223 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 SNAP29O95721 258 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 CLPTM1O96005 669 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 C1QCP02747 245 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 SHBGP04278 402 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 LCKP06239 509 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 FAM157BP0CG42 384 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 DRD4P21917 467 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 AQP5P55064 265 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 PDCD4Q53EL6 469 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 COX20Q5RI15 118 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 ZNF621Q6ZSS3 439 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 SCAIQ8N9R8 606 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 GLB1L3Q8NCI6 653 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 DEFB108BQ8NET1 73 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 EPS8L3Q8TE67 593 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 TAAR8Q969N4 342 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 MMP27Q9H306 513 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 CDH20Q9HBT6 801 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 THUMPD1Q9NXG2 353 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 ZNF69Q9UC07 566 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 TESQ9UGI8 421 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 PURGQ9UJV8 347 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 IFT52Q9Y366 437 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 GPR45Q9Y5Y3 372 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 AUP1Q9Y679 476 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
TRAPPC9-203ENST00000517667 PTHP01270 115 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 BCHEP06276 602 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 MDKP21741 143 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 MTNR1AP48039 350 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 GABPB1Q06547 395 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 SLC9A3R2Q15599 337 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 MAPK11Q15759 364 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 TSTQ16762 297 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 TBC1D28Q2M2D7 210 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 LEG1Q6P5S2 330 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 C17orf107Q6ZR85 190 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 DPPA2Q7Z7J5 298 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 CLIP4Q8N3C7 705 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 OR1J2Q8NGS2 313 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 OR6S1Q8NH40 331 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 CCL17Q92583 94 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 TMIGD2Q96BF3 282 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 SLC41A3Q96GZ6 507 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 PPP1R36Q96LQ0 422 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 TSPAN32Q96QS1 320 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 EPYCQ99645 322 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 MRI1Q9BV20 369 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 EMC6Q9BV81 110 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 ASPNQ9BXN1 380 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 EGLN1Q9GZT9 426 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 LRMDAQ9H2I8 198 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 TCF7L2Q9NQB0 619 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 NKIRAS1Q9NYS0 192 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 UBAP1Q9NZ09 502 aa9.72□□□□□ -0.85
TRAPPC9-203ENST00000517667 ARHGAP32A7KAX9 2087 aa9.71□□□□□ -0.85
TRAPPC9-203ENST00000517667 A0A087WUJ7 227 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 A0A0G2JPF8 293 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 PLSCR5A0PG75 271 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 HNRNPCL2B2RXH8 293 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 HNRNPCL3B7ZW38 293 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 MS4A18H0YCH9 400 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 M0QZ24 198 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 HNRNPCL1O60812 293 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 FARS2O95363 451 aaKnown RBP9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 HPRP00739 348 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 KNG1P01042 644 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 IGHV3-13P01766 116 aa9.71□□□□□ -0.86
TRAPPC9-203ENST00000517667 IGHMP01871 453 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms