RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 ZNF74Q16587 644 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 ENTPD8Q5MY95 495 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 DEF8Q6ZN54 512 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-202ENST00000517403 H1FNTQ75WM6 255 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-202ENST00000517403 ZNF627Q7L945 461 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 HDXQ7Z353 690 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 DHDDSQ86SQ9 333 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 NKAIN4Q8IVV8 208 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 SKA3Q8IX90 412 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 KIRREL3Q8IZU9 778 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 CLDN22Q8N7P3 220 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 ADPRHL1Q8NDY3 354 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 TMEM54Q969K7 222 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 SLC35B4Q969S0 331 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 NMD3Q96D46 503 aaKnown RBP7.42□□□□□ -1.22
PABPC1-202ENST00000517403 ANKRD27Q96NW4 1050 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 CGREF1Q99674 301 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 MCHR1Q99705 422 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 CCDC28BQ9BUN5 200 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 ZNF442Q9H7R0 627 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 C12orf10Q9HB07 376 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 OBP2BQ9NPH6 170 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-202ENST00000517403 CACNG2Q9Y698 323 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 ANK2Q01484 3957 aa7.42□□□□□ -1.22
PABPC1-202ENST00000517403 M0QX08 132 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 LMX1BO60663 402 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 RP2O75695 350 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 KRT33AO76009 404 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 PDE5AO76074 875 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 VAMP5O95183 116 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 CLPTM1O96005 669 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 CRYAAP02489 173 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 ADRA2AP08913 450 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TACSTD2P09758 323 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 IFNGR1P15260 489 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 ZNF23P17027 643 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 COL8A2P25067 703 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 GIFP27352 417 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 PDLIM4P50479 330 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 ATP4BP51164 291 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 UBE2NP61088 152 aaKnown RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 SNRPD2P62316 118 aaKnown RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 MYBPC1Q00872 1141 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TGFBR3Q03167 851 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 FMODQ06828 376 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 PUDPQ08623 228 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 FHL1Q13642 323 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 SQLEQ14534 574 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 RAB39AQ14964 217 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 CR1LQ2VPA4 569 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 ALKBH6Q3KRA9 238 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 C3orf36Q3SXR2 165 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 OTPQ5XKR4 325 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 SPATA21Q7Z572 469 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TSEN54Q7Z6J9 526 aaKnown RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 CALHM3Q86XJ0 350 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 ARMC8Q8IUR7 673 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 DPP10Q8N608 796 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 HIPK4Q8NE63 616 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 BHLHE22Q8NFJ8 381 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 MOSPD2Q8NHP6 518 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TMEM255BQ8WV15 326 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 CKAP2Q8WWK9 683 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 PROX1Q92786 737 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 MRPL24Q96A35 216 aaKnown RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 SNX18Q96RF0 628 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 FOXB1Q99853 325 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 SH3GL3Q99963 347 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TMEM43Q9BTV4 400 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 C19orf24Q9BVV8 132 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 RACGAP1Q9H0H5 632 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 OR51B6Q9H340 312 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 NARFLQ9H6Q4 476 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 KAT8Q9H7Z6 458 aaKnown RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TMEM160Q9NX00 188 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 DCAF16Q9NXF7 216 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 MRPL39Q9NYK5 338 aaKnown RBP7.41□□□□□ -1.22
PABPC1-202ENST00000517403 SLC7A7Q9UM01 511 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 UGT2A1Q9Y4X1 527 aa7.41□□□□□ -1.22
PABPC1-202ENST00000517403 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 LOC100289279A0A1B0GTE1 492 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 B9A039 149 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 C5orf58C9J3I9 102 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 IMPA2O14732 288 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 CHP2O43745 196 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 EDF1O60869 148 aaKnown RBP7.4□□□□□ -1.22
PABPC1-202ENST00000517403 SLC2A10O95528 541 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 CH25HO95992 272 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 AVPP01185 164 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 SCG5P05408 212 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 ASAH2BP0C7U1 165 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 PGA4P0DJD7 388 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 PGA3P0DJD8 388 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 CD79AP11912 226 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 APEHP13798 732 aaKnown RBP7.4□□□□□ -1.22
PABPC1-202ENST00000517403 DAOP14920 347 aa7.4□□□□□ -1.22
PABPC1-202ENST00000517403 ZNF26P17031 533 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms