RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 CACNA1FO60840 1977 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IGLV3-22A0A075B6J6 115 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 A0A087WYN8 130 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 TRAV39A0A0B4J263 110 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 GLYATL1P3A0A0U1RQE8 302 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 A0A1B0GU03 582 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 FAM231BA6NCW3 169 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 A6NDN8 102 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 USP27XA6NNY8 438 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CENPXA8MT69 81 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 C12orf71A8MTZ7 269 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 KRTAP29-1A8MX34 341 aaPredicted RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ERVV-1B6SEH8 477 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 E7EWF7 191 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ZBTB5O15062 677 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 AGPAT2O15120 278 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 NVLO15381 856 aaKnown RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 MBTPS2O43462 519 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CLDN11O75508 207 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 EIF3GO75821 320 aaKnown RBP eCLIP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 AQP8O94778 261 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CCNB2O95067 398 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 FARS2O95363 451 aaKnown RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 NPPAP01160 153 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IGKV3-20P01619 116 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IGHV3-23P01764 117 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 HBE1P02100 147 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 MBP02144 154 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 FGGP02679 453 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IFNW1P05000 195 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CLTAP09496 248 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SLC35E2P0CK97 266 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 GFAPP14136 432 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 FOLR2P14207 255 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 HOXB8P17481 243 aaPredicted RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CTRB1P17538 263 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CXCR2P25025 360 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IL2RGP31785 369 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 HMGCLP35914 325 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 MDH2P40926 338 aaKnown RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CSKP41240 450 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 KCNJ3P48549 501 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 GSSP48637 474 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 KLK7P49862 253 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SLC26A2P50443 739 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IST1P53990 364 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SUB1P53999 127 aaKnown RBP eCLIP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CRISP1P54107 249 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 YWHAEP62258 255 aaKnown RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 MS4A2Q01362 244 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ZNF92Q03936 586 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 BCL2L1Q07817 233 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 HNRNPA0Q13151 305 aaKnown RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SLAQ13239 276 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 GPNMBQ14956 572 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 TRAM2Q15035 370 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 FCN2Q15485 313 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 USF2Q15853 346 aaPredicted RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ATP6AP1Q15904 470 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 NRF1Q16656 503 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 Q1RN00 199 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 RPEL1Q2QD12 228 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 KRT71Q3SY84 523 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 TIMM50Q3ZCQ8 353 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 HIGD2BQ4VC39 106 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 HSP90B2PQ58FF3 399 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 PPM1LQ5SGD2 360 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 UTF1Q5T230 341 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CASC10Q5T4H9 136 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SPECC1LQ69YQ0 1117 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CLEC6AQ6EIG7 209 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CTRB2Q6GPI1 263 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ANKRD26P1Q6NSI1 321 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CGB2Q6NT52 195 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ZNF343Q6P1L6 599 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 C1orf94Q6P1W5 598 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 PAMR1Q6UXH9 720 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 BAIAP2L2Q6UXY1 529 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 Q6ZN92 141 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 GPRIN3Q6ZVF9 776 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SLC35D2Q76EJ3 337 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 MOB1BQ7L9L4 216 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 ZNF589Q86UQ0 364 aaPredicted RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SLC25A42Q86VD7 318 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 SLC26A11Q86WA9 606 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CDC20BQ86Y33 519 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 IQCF2Q8IXL9 164 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 CMTM1Q8IZ96 169 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 C6orf223Q8N319 242 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 EID2Q8N6I1 236 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 POM121L12Q8N7R1 296 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1□□□□□ -2.25
RN7SKP88-201ENST00000516847 LRRC75AQ8NAA5 344 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 TMEM104Q8NE00 496 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 OR56A4Q8NGH8 313 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 OR2A1Q8NGT9 310 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 OR10R2Q8NGX6 335 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 OR2G2Q8NGZ5 317 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 OR52E5Q8NH55 327 aa1□□□□□ -2.25
RN7SKP88-201ENST00000516847 LILRB4Q8NHJ6 448 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms