RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 POLQO75417 2590 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 MYH11P35749 1972 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 HEATR5BQ9P2D3 2071 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 DENND4BO75064 1496 aaPredicted RBP-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 FAM230AA0A1W2PPH8 454 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 MAGEB16A2A368 324 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CACNB4O00305 520 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC7A4O43246 635 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CHST10O43529 356 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 ABOP16442 354 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 IMPDH1P20839 514 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 MC5RP33032 325 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 ARL3P36405 182 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CDKN2BP42772 138 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 NOVA1P51513 510 aaKnown RBP-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CMC4P56277 68 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 IGBP1P78318 339 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 MRPL28Q13084 256 aaKnown RBP-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CDK5R1Q15078 307 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 PON3Q15166 354 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 MPV17L2Q567V2 206 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 LRRC66Q68CR7 880 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR8G2PQ6IF36 304 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANKRD18AQ8IVF6 992 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 ZCCHC7Q8N3Z6 543 aaKnown RBP-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC26A10Q8NG04 563 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR11H7Q8NGC8 314 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 SVIPQ8NHG7 77 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 RORBQ92753 470 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CPNE4Q96A23 557 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 P2RX4Q99571 388 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 CHCHD7Q9BUK0 85 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 FUNDC2Q9BWH2 189 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 NFKBIZQ9BYH8 718 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 NLNQ9BYT8 704 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 WASH6PQ9NQA3 447 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 TRPM6Q9BX84 2022 aa-2.41□□□□□ -2.8
RNU6-539P-201ENST00000516665 PTPRUQ92729 1446 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 IGKV1-27A0A075B6S5 117 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 FFAR1O14842 300 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 DIAPH2O60879 1101 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 GSTA1P08263 222 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 CT62P0C5K7 136 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 CCDC130P13994 396 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 POU2F1P14859 743 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 XBP1P17861 261 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 YWHABP31946 246 aaKnown RBP-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 ACADSBP45954 432 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 TGM4P49221 684 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 PLP1P60201 277 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 MAMLD1Q13495 774 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 DMC1Q14565 340 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 TMPRSS11AQ6ZMR5 421 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 C1orf186Q6ZWK4 172 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC22A16Q86VW1 577 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 MREGQ8N565 214 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 ST8SIA1Q92185 356 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 RIT1Q92963 219 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 TSPAN18Q96SJ8 248 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 CCDC106Q9BWC9 280 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 FAIM2Q9BWQ8 316 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 MRPL1Q9BYD6 325 aaKnown RBP-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC19A3Q9BZV2 496 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 LMAN1LQ9HAT1 526 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 XCL2Q9UBD3 114 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 WARS2Q9UGM6 360 aaKnown RBP-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 HMGXB4Q9UGU5 601 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 GMPPBQ9Y5P6 360 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 BRCA1P38398 1863 aaKnown RBP-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 NUMA1Q14980 2115 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 LOXHD1Q8IVV2 1947 aa-2.42□□□□□ -2.8
RNU6-539P-201ENST00000516665 TGP01266 2768 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 CACNA1HO95180 2353 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 PLEKHG2Q9H7P9 1386 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 IGHV3-72A0A0B4J1Y9 119 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 GLYATL1P3A0A0U1RQE8 302 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 FAM47DPA6NHR8 397 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 ARHGAP42A6NI28 874 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 PTGES3LE9PB15 166 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 CHEK1O14757 476 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 GEMIN2O14893 280 aaKnown RBP-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 ADRB2P07550 413 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 ZNF22P17026 224 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 SOAT1P35610 550 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 PSMB10P40306 273 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 ACSF3Q4G176 576 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 BCL7AQ4VC05 210 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 TIMM23BQ5SRD1 257 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 PLEKHS1Q5SXH7 462 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 P3H4Q92791 437 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 Q96M85 177 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR8B2Q96RD0 313 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 B9D2Q9BPU9 175 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 ATG101Q9BSB4 218 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 REG4Q9BYZ8 158 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 ZDHHC6Q9H6R6 413 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 RNF167Q9H6Y7 350 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 SUDS3Q9H7L9 328 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 MED9Q9NWA0 146 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 TEKT2Q9UIF3 430 aa-2.43□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms