RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 IGHV3-9P01782 118 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 SERPIND1P05546 499 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CD55P08174 381 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 MELTFP08582 738 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CCDC172P0C7W6 258 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 PVRP15151 417 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ZNF24P17028 368 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CD9P21926 228 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 U2AF2P26368 475 aaKnown RBP eCLIP2.43□□□□□ -2.023e-11■■■□□ 16.4
HERC4-215ENST00000515753 ANXA13P27216 316 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 FGF9P31371 208 aaPredicted RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 HNRNPH3P31942 346 aaKnown RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 IFNA8P32881 189 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 OPRD1P41143 372 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 DAP3P51398 398 aaKnown RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 PRKXP51817 358 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 EFNA3P52797 238 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 KRTAP10-1P60331 282 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 RAB10P61026 200 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 RAB11AP62491 216 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 PAX5Q02548 391 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ASPHQ12797 758 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 TGFBIQ15582 683 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 RAB11BQ15907 218 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 DMRTC1Q5HYR2 192 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ZNF506Q5JVG8 444 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 FAM219BQ5XKK7 198 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 PRSS48Q7RTY5 328 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 LINC00523Q86TU6 105 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ZNF584Q8IVC4 421 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 IQCF2Q8IXL9 164 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 GPD1LQ8N335 351 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 OR2L13Q8N349 312 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 MTURNQ8N3F0 131 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ZNF491Q8N8L2 437 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 OR4K14Q8NGD5 310 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 OR9A4Q8NGU2 314 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 TYMSOSQ8TAI1 123 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ACMSDQ8TDX5 336 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 HTR3CQ8WXA8 447 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CRYGNQ8WXF5 182 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 NRGNQ92686 78 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CIDECQ96AQ7 238 aaPredicted RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 PPP1R16AQ96I34 528 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 PLEKHA8Q96JA3 519 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ZNF641Q96N77 438 aaPredicted RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 MBOAT4Q96T53 435 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 FMO2Q99518 471 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CHMP4BQ9H444 224 aaKnown RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 ELOVL6Q9H5J4 265 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 AMBNQ9NP70 447 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 MEPEQ9NQ76 525 aaPredicted RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 CUTCQ9NTM9 273 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 ZMAT5Q9UDW3 170 aaKnown RBP2.43□□□□□ -2.02
HERC4-215ENST00000515753 PHF11Q9UIL8 331 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 NUP50Q9UKX7 468 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 TMCO1Q9UM00 188 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 CPQQ9Y646 472 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 AUP1Q9Y679 476 aa2.43□□□□□ -2.02
HERC4-215ENST00000515753 LRRC37AA6NMS7 1700 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 SIPA1L3O60292 1781 aaPredicted RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 IQANK1A0A1B0GTG1 560 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 TUBAL3A6NHL2 446 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 SAGE2PA6NJ88 616 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 A8MXQ7 604 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 IDSB3KWA1 339 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 KIF2AO00139 706 aaPredicted RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 CLOCKO15516 846 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 PHF1O43189 567 aaPredicted RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 PSTPIP1O43586 416 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 CABYRO75952 493 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 OR2J3O76001 311 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 SEMA4FO95754 770 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 MMP1P03956 469 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 LGALS2P05162 132 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 ZNF43P17038 809 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 SRMP19623 302 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 STOMP27105 288 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 IL12AP29459 219 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 HMOX2P30519 316 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 VHLP40337 213 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 YAP1P46937 504 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 ARHGDIAP52565 204 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 HMGCS2P54868 508 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 TIMM10P62072 90 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 VLDLRP98155 873 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 MECOMQ03112 1051 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 PUDPQ08623 228 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 IL18R1Q13478 541 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 DPYSL3Q14195 570 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 GNMTQ14749 295 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 STK38Q15208 465 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 DGUOKQ16854 277 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 TRIM16LQ309B1 348 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 TMEM52BQ4KMG9 183 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 C14orf28Q4W4Y0 310 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 HSP90B2PQ58FF3 399 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 HSP90AA4PQ58FG1 418 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 BEX5Q5H9J7 111 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 FAM120AOSQ5T036 256 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms