RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ACSM5Q6NUN0 579 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 TFAP2EQ6VUC0 442 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 WDFY1Q8IWB7 410 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 POMGNT2Q8NAT1 580 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 NOXO1Q8NFA2 376 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 HRASLS5Q96KN8 279 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 SNX18Q96RF0 628 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 KCNK17Q96T54 332 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 ALG12Q9BV10 488 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 PRRG3Q9BZD7 231 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 LINC00470Q9BZP3 86 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 SLCO5A1Q9H2Y9 848 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 C12orf49Q9H741 205 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 COQ3Q9NZJ6 369 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 ERRFI1Q9UJM3 462 aaPredicted RBP18.57■□□□□ 0.56
LSM6-207ENST00000515311 FOXD3Q9UJU5 478 aaPredicted RBP18.57■□□□□ 0.56
LSM6-207ENST00000515311 PROCRQ9UNN8 238 aa18.57■□□□□ 0.56
LSM6-207ENST00000515311 TRMUO75648 421 aaKnown RBP18.56■□□□□ 0.56
LSM6-207ENST00000515311 CNOT4O95628 575 aaKnown RBP18.56■□□□□ 0.56
LSM6-207ENST00000515311 IFNGP01579 166 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 NR2C1P13056 603 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 HIST1H1CP16403 213 aaKnown RBP18.56■□□□□ 0.56
LSM6-207ENST00000515311 CHRNB4P30926 498 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 RUNX1T1Q06455 604 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 CAMK2DQ13557 499 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 HIST3H3Q16695 136 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 TMEM236Q5W0B7 351 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 C12orf73Q69YU5 71 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 CCDC71Q8IV32 467 aaPredicted RBP18.56■□□□□ 0.56
LSM6-207ENST00000515311 C20orf196Q8IYI0 205 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 FNDC8Q8TC99 324 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 ASB5Q8WWX0 329 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 HDAC2Q92769 488 aaKnown RBP18.56■□□□□ 0.56
LSM6-207ENST00000515311 SLC38A2Q96QD8 506 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 PITX2Q99697 317 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 CMC2Q9NRP2 79 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 FAM118AQ9NWS6 357 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 MALT1Q9UDY8 824 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 KLHL21Q9UJP4 597 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 ALPK2Q86TB3 2170 aa18.56■□□□□ 0.56
LSM6-207ENST00000515311 FREM1Q5H8C1 2179 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 PCNX1Q96RV3 2341 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 PRSS37A4D1T9 235 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 RIIAD1A6NNX1 92 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 MSTNO14793 375 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 SLC16A6O15403 523 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 ARHGEF9O43307 516 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 PLA2G2AP14555 144 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 BMP5P22003 454 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 EDNRAP25101 427 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 CSNK1A1P48729 337 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 CLRN1P58418 232 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 ZNF362Q5T0B9 420 aaPredicted RBP18.55■□□□□ 0.56
LSM6-207ENST00000515311 SLC35F1Q5T1Q4 408 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 JAZF1Q86VZ6 243 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 TMEM54Q969K7 222 aa18.55■□□□□ 0.56
LSM6-207ENST00000515311 NDRG4Q9ULP0 352 aaKnown RBP18.55■□□□□ 0.56
LSM6-207ENST00000515311 RELNP78509 3460 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 SURF4O15260 269 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 ZNF3P17036 446 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 AGAP20933 346 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 AQP4P55087 323 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.54■□□□□ 0.56
LSM6-207ENST00000515311 KEAP1Q14145 624 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 TSPO2Q5TGU0 170 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 CARD17Q5XLA6 110 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 FBXW9Q5XUX1 488 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 PTCHD4Q6ZW05 846 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 MRGPRGQ86SM5 289 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 LIX1LQ8IVB5 337 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 GPR137CQ8N3F9 429 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 ZNF555Q8NEP9 628 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 OR52E2Q8NGJ4 325 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 OR6N1Q8NGY5 312 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 OR4K13Q8NH42 304 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 NMD3Q96D46 503 aaKnown RBP18.54■□□□□ 0.56
LSM6-207ENST00000515311 B3GAT2Q9NPZ5 323 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 SLC7A10Q9NS82 523 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 GLTPQ9NZD2 209 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 VSX1Q9NZR4 365 aaPredicted RBP18.54■□□□□ 0.56
LSM6-207ENST00000515311 JKAMPQ9P055 326 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 FLNCQ14315 2725 aa18.54■□□□□ 0.56
LSM6-207ENST00000515311 DIDO1Q9BTC0 2240 aaKnown RBP18.54■□□□□ 0.56
LSM6-207ENST00000515311 LOC100130705A0A1B0GUX0 176 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 SLC22A23A1A5C7 686 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 H0YAE9 185 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 SMNDC1O75940 238 aaKnown RBP eCLIP18.53■□□□□ 0.56
LSM6-207ENST00000515311 GGT2P36268 569 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 CDKN2AP42771 156 aaKnown RBP18.53■□□□□ 0.56
LSM6-207ENST00000515311 HSPA13P48723 471 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 ZNF133P52736 654 aaPredicted RBP18.53■□□□□ 0.56
LSM6-207ENST00000515311 ITGADQ13349 1161 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 SLC25A35Q3KQZ1 300 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 THEM4Q5T1C6 240 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 IZUMO2Q6UXV1 221 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 Q6ZT83 130 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.53■□□□□ 0.56
LSM6-207ENST00000515311 ABHD12BQ7Z5M8 362 aaPredicted RBP18.53■□□□□ 0.56
LSM6-207ENST00000515311 DHRSXQ8N5I4 330 aa18.53■□□□□ 0.56
LSM6-207ENST00000515311 SYT14Q8NB59 555 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms