RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PRR14Q9BWN1 585 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 OR11A1Q9GZK7 315 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 SLC24A3Q9HC58 644 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 KRCC1Q9NPI7 259 aaPredicted RBP7.41□□□□□ -1.22
CCL28-204ENST00000514421 PLSCR4Q9NRQ2 329 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 SELENONQ9NZV5 590 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 AASSQ9UDR5 926 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 ENPP5Q9UJA9 477 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 TMEM5Q9Y2B1 443 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 EMC9Q9Y3B6 208 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 CACNA1DQ01668 2161 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 CACNA1CQ13936 2221 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 CENPEQ02224 2701 aa7.41□□□□□ -1.22
CCL28-204ENST00000514421 MPDZO75970 2070 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 MED12LQ86YW9 2145 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 DOCK7Q96N67 2140 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 ELOA3DA6NLF2 546 aaPredicted RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 CHP2O43745 196 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 CYTIPO60759 359 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 SS18L1O75177 396 aaPredicted RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 NPIPB7O75200 414 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 INMTO95050 263 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 ATE1O95260 518 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 CGAP01215 116 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 UQCRC1P31930 480 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 SIRPAP78324 504 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 H3F3AP84243 136 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 PIGFQ07326 219 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 RASGEF1BQ0VAM2 473 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 GINS1Q14691 196 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 CTF1Q16619 201 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 ELOA3BQ3SY89 546 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 ALG10BQ5I7T1 473 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 C1orf140Q5VVS0 124 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 RPL13AP3Q6NVV1 102 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 SLC27A4Q6P1M0 643 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 VWA1Q6PCB0 445 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 CASP12Q6UXS9 341 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 WDR88Q6ZMY6 472 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 MEX3BQ6ZN04 569 aaKnown RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 ZNF620Q6ZNG0 422 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 AHSA2Q719I0 299 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 LUZP2Q86TE4 346 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 TUSC5Q8IXB3 177 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 DMRTC2Q8IXT2 367 aaPredicted RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 ZNF610Q8N9Z0 462 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 ELOA3Q8NG57 546 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 OR8D4Q8NGM9 314 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 OR6K3Q8NGY3 331 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 RNF128Q8TEB7 428 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 KCTD12Q96CX2 325 aaKnown RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 DACH2Q96NX9 599 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 FUNDC2Q9BWH2 189 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 RBM24Q9BX46 236 aaKnown RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 TAPBPLQ9BX59 468 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 RACGAP1Q9H0H5 632 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 FANCFQ9NPI8 374 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.22
CCL28-204ENST00000514421 ELOVL5Q9NYP7 299 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 KLHL9Q9P2J3 617 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 SLC7A7Q9UM01 511 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 CLEC4AQ9UMR7 237 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 PROCRQ9UNN8 238 aa7.4□□□□□ -1.22
CCL28-204ENST00000514421 UTP20O75691 2785 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 A0A087WUJ7 227 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 IGHV3-15A0A0B4J1V0 119 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 LIPT2A6NK58 231 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ZNF724A8MTY0 619 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 EEF1E1-BLOC1S5C9J1V9 151 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 H3BN98 237 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 GPR171O14626 319 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 SMAD9O15198 467 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 SLC22A1O15245 554 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 EEF1E1O43324 174 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 OR2T1O43869 369 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 PRKYO43930 277 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ENTPD6O75354 484 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 SOX14O95416 240 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 IGFBP1P08833 259 aaPredicted RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 IMPDH2P12268 514 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 IGFBP2P18065 325 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 C21orf33P30042 268 aaPredicted RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 IDUAP35475 653 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 TGFBR2P37173 567 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ST3GAL4Q11206 333 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 OR7A5Q15622 319 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ZNF787Q6DD87 383 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ACSM5Q6NUN0 579 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ZNF474Q6S9Z5 364 aaPredicted RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 C5orf46Q6UWT4 87 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 RRM2BQ7LG56 351 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 NRMQ8IXM6 262 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 MFSD8Q8NHS3 518 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 TEX47Q8TBZ9 253 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 TMEM163Q8TC26 289 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ABHD3Q8WU67 409 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 TMEM255BQ8WV15 326 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms