RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CLDN24A6NM45 220 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SYCE1LA8MT33 242 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 EIF4E2O60573 245 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 GPIP06744 558 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 MMP9P14780 707 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 MPV17P39210 176 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 IDH2P48735 452 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 UCP2P55851 309 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 BNIP2Q12982 314 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 MFSD13AQ14CX5 517 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ARSJQ5FYB0 599 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 SPDYAQ5MJ70 313 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 PHYHD1Q5SRE7 291 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 C11orf88Q6PI97 169 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 NLRC3Q7RTR2 1065 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 EPHX4Q8IUS5 362 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SPERTQ8NA61 448 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ZNF420Q8TAQ5 688 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 FGFBP3Q8TAT2 258 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 MAGOHBQ96A72 148 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 EGLN2Q96KS0 407 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 C3orf30Q96M34 536 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SF3B5Q9BWJ5 86 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 ACPTQ9BZG2 426 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 BRF2Q9HAW0 419 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 NMRAL1Q9HBL8 299 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 CDH20Q9HBT6 801 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ZCCHC3Q9NUD5 404 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 GRHL1Q9NZI5 618 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 KCNE5Q9UJ90 142 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SNX6Q9UNH7 406 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 TMED7Q9Y3B3 224 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 POLR3HQ9Y535 204 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 ZNF879B4DU55 563 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 H0YHG0 523 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ANKRD28O15084 1053 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ENSAO43768 121 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 FCMRO60667 390 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 OR4F21O95013 312 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 CLIC3O95833 236 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 CYB5R3P00387 301 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 IGHV3-13P01766 116 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SERPINA5P05154 406 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ZNF26P17031 533 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 ZNF43P17038 809 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 TACR3P29371 465 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 TYK2P29597 1187 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 DGCR2P98153 550 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 HOXA4Q00056 320 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 TP53BP2Q13625 1128 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 FASTKD3Q14CZ7 662 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 PPP1R7Q15435 360 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SMU1Q2TAY7 513 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 TMEM95Q3KNT9 176 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 KCTD18Q6PI47 426 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 LYPD2Q6UXB3 125 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 CCDC36Q8IYA8 594 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 CCDC170Q8IYT3 715 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ZNF101Q8IZC7 436 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 MIER2Q8N344 545 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 PTGR2Q8N8N7 351 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 OR2Z1Q8NG97 314 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 OR8B3Q8NGG8 313 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 OR5D16Q8NGK9 328 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 HOXB13Q92826 284 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 NEIL1Q96FI4 390 aaPredicted RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 CALR3Q96L12 384 aaKnown RBP2.66□□□□□ -1.98
CHD1-211ENST00000514344 OR8B2Q96RD0 313 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 TMEM246Q9BRR3 403 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 EMC6Q9BV81 110 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 ACTRT3Q9BYD9 372 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 HOXD1Q9GZZ0 328 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SIRT7Q9NRC8 400 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 SERTAD4Q9NUC0 356 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 GPATCH2Q9NW75 528 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 OSGIN1Q9UJX0 560 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 PCDHGB4Q9UN71 923 aa2.66□□□□□ -1.98
CHD1-211ENST00000514344 MEIOCA2RUB1 952 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 LIPT2A6NK58 231 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 NPIPB9F8W1W9 429 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 RPL36A-HNRNPH2H7BZ11 118 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 P2RY10O00398 339 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 PDPK1O15530 556 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 LCN1P31025 176 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 CLK1P49759 484 aaKnown RBP2.65□□□□□ -1.98
CHD1-211ENST00000514344 NFYCQ13952 458 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 ZKSCAN8Q15776 578 aaPredicted RBP2.65□□□□□ -1.98
CHD1-211ENST00000514344 UAP1Q16222 522 aaPredicted RBP2.65□□□□□ -1.98
CHD1-211ENST00000514344 MOGQ16653 247 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 SPIN4Q56A73 249 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 COX20Q5RI15 118 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 WDR25Q64LD2 544 aaPredicted RBP2.65□□□□□ -1.98
CHD1-211ENST00000514344 UNQ9370/PRO34162Q6UXP9 181 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 EIF3MQ7L2H7 374 aaKnown RBP2.65□□□□□ -1.98
CHD1-211ENST00000514344 PDIK1LQ8N165 341 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 PNKDQ8N490 385 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 RPP25LQ8N5L8 163 aaKnown RBP2.65□□□□□ -1.98
CHD1-211ENST00000514344 ZNF283Q8N7M2 679 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 ITLN1Q8WWA0 313 aa2.65□□□□□ -1.98
CHD1-211ENST00000514344 RORBQ92753 470 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms