RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 B2RBV5 119 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 C11orf98E9PRG8 122 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 BLOC1S5-TXNDC5H3BN57 136 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 M0R3G1 203 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 CDC42EP2O14613 210 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 ARPC2O15144 300 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 CLOCKO15516 846 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 RNF13O43567 381 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 KRT33AO76009 404 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 OR6A2O95222 327 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 HIST1H2ABP04908 130 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 FOSL1P15407 271 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 MSX2P35548 267 aaPredicted RBP8.45□□□□□ -1.06
RNF4-221ENST00000513643 HMGA2P52926 109 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
RNF4-221ENST00000513643 CAMK2DQ13557 499 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 TAF11Q15544 211 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 MST1LQ2TV78 715 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 NRN1LQ496H8 165 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 ALKBH2Q6NS38 261 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 DNM1P46Q6ZS02 220 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 FKBP9P1Q75LS8 142 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 HIST3H2AQ7L7L0 130 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 PIWIL3Q7Z3Z3 882 aaKnown RBP8.45□□□□□ -1.06
RNF4-221ENST00000513643 NANOGNBQ7Z5D8 188 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 MYPOPQ86VE0 399 aaPredicted RBP8.45□□□□□ -1.06
RNF4-221ENST00000513643 NRMQ8IXM6 262 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 ASB10Q8WXI3 467 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 HIST1H2ACQ93077 130 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 FAM162AQ96A26 154 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 SLC38A2Q96QD8 506 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 DHRS9Q9BPW9 319 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 KATNB1Q9BVA0 655 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 C1QTNF6Q9BXI9 259 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 TXNIPQ9H3M7 391 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 DENND2DQ9H6A0 471 aaPredicted RBP8.45□□□□□ -1.06
RNF4-221ENST00000513643 TAS2R1Q9NYW7 299 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 ACTR3BQ9P1U1 418 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 TCRBV5S2A0A599 114 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 M0R1B8 84 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 DHHO43323 396 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 SMPD2O60906 423 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 TRMUO75648 421 aaKnown RBP8.44□□□□□ -1.06
RNF4-221ENST00000513643 BCL10O95999 233 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 F13BP05160 661 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 CECR9P0C854 216 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 IFI30P13284 250 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 CDH2P19022 906 aaPredicted RBP8.44□□□□□ -1.06
RNF4-221ENST00000513643 TCN1P20061 433 aaPredicted RBP8.44□□□□□ -1.06
RNF4-221ENST00000513643 CALB2P22676 271 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 IFNA8P32881 189 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 TTKP33981 857 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 ARR3P36575 388 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 MAGEA2P43356 314 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 OMPP47874 163 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 CSNK1A1P48729 337 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 SLC9A3P48764 834 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 PTH2RP49190 550 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 FXYD6P3P58550 94 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 MS4A2Q01362 244 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 NAAAQ02083 359 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 HGFACQ04756 655 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 FOXD4Q12950 439 aaPredicted RBP8.44□□□□□ -1.06
RNF4-221ENST00000513643 SEC23BQ15437 767 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 C10orf128Q5T292 105 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 CARD17Q5XLA6 110 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 ZNF544Q6NX49 715 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 PODNL1Q6PEZ8 512 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 RINLQ6ZS11 566 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 FGFBP3Q8TAT2 258 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 ZNF519Q8TB69 540 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 MCHR2Q969V1 340 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 ZNF566Q969W8 418 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 TNFRSF13CQ96RJ3 184 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 GPA33Q99795 319 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 FOXB1Q99853 325 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 ULBP2Q9BZM5 246 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 SEC61A2Q9H9S3 476 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 SMURF2Q9HAU4 748 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 NOX3Q9HBY0 568 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 IL1RAPQ9NPH3 570 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 INIPQ9NRY2 104 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 UGT2A1Q9Y4X1 527 aa8.44□□□□□ -1.06
RNF4-221ENST00000513643 C2CD3Q4AC94 2353 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 IGKV1D-43A0A0B4J1Z2 117 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 TRBV4-1A0A0J9YWV2 114 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 A0A1W2PRG6 482 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ACOT8O14734 319 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 MGRN1O60291 552 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 IGHG1P01857 330 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 H1F0P07305 194 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 QDPRP09417 244 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 UMPSP11172 480 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ZNF35P13682 527 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 CD99P14209 185 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ACADSP16219 412 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ZNF14P17017 642 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms