RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	AGER	Q15109	404 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	ODF4	Q2M2E3	257 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	RPL13AP3	Q6NVV1	102 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	ENPP7	Q6UWV6	458 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	RNF44	Q7L0R7	432 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	FAM219A	Q8IW50	185 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	TEX19	Q8NA77	164 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	IRF7	Q92985	503 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	SMIM19	Q96E16	107 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	MISP3	Q96FF7	219 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	C16orf58	Q96GQ5	468 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	SULT4A1	Q9BR01	284 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	UNKL	Q9H9P5	680 aa	Known RBP	10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	SEC61A2	Q9H9S3	476 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	NEUROD4	Q9HD90	331 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	SLC7A7	Q9UM01	511 aa		10.19	□□□□□ -0.78
PDCD6-210	ENST00000513582	PLXND1	Q9Y4D7	1925 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	SLC22A31	A6NKX4	558 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582		C9JQL5	133 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	CACNB4	O00305	520 aa	Predicted RBP	10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	SLC16A5	O15375	505 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	RAB5A	P20339	215 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	GRPR	P30550	384 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	RAB5C	P51148	216 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	SPCS3	P61009	180 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	CRMP1	Q14194	572 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	CDK5R1	Q15078	307 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	CDKN3	Q16667	212 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	TMEM31	Q5JXX7	168 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	PLEKHS1	Q5SXH7	462 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	TTLL10	Q6ZVT0	673 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	RHOU	Q7L0Q8	258 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	TMPRSS12	Q86WS5	348 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	TMEFF1	Q8IYR6	380 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	OR51A7	Q8NH64	312 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	DIO2	Q92813	273 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	PMM1	Q92871	262 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	HAVCR1	Q96D42	359 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	MCHR1	Q99705	422 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	UCK1	Q9HA47	277 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	FN3KRP	Q9HA64	309 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	IL36A	Q9UHA7	158 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	FARSA	Q9Y285	508 aa	Known RBP	10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	ZNF749	O43361	778 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	HLA-A	P01891	365 aa	Known RBP	10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	TPT1	P13693	172 aa	Known RBP	10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	ID4	P47928	161 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	RNF4	P78317	190 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	SIRPA	P78324	504 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	HTRA4	P83105	476 aa	Predicted RBP	10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	ZNF345	Q14585	488 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	ASTL	Q6HA08	431 aa	Predicted RBP	10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	KCTD9	Q7L273	389 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	OR5T3	Q8NGG3	340 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	SLC41A3	Q96GZ6	507 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	POM121	Q96HA1	1249 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	HS6ST2	Q96MM7	605 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	VN1R3	Q9BXE9	311 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	KCNK15	Q9H427	330 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	PPP4R1L	Q9P1A2	415 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	WASF3	Q9UPY6	502 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582	KNTC1	P50748	2209 aa		10.18	□□□□□ -0.78
PDCD6-210	ENST00000513582		A0A087X0M5	115 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NPIPA5	A0A0B4J1W7	369 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	C13orf42	A0A1B0GVH6	325 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582		A0A1B0GX30	115 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	FAM86C2P	A6NEL3	165 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NPIPA7	E9PJI5	369 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NDUFS4	O43181	175 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	FGF16	O43320	207 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	MAS1	P04201	325 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	THY1	P04216	161 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NPIPA8	P0DM63	369 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NPPB	P16860	134 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NTS	P30990	170 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	NDUFA6	P56556	154 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	REL	Q04864	619 aa	Predicted RBP	10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	KCNAB1	Q14722	419 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	EXOSC6	Q5RKV6	272 aa	Known RBP	10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	SLC8B1	Q6J4K2	584 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	GDF7	Q7Z4P5	450 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	AMZ2	Q86W34	360 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	OR10D4P	Q8NGN7	298 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	OR5M8	Q8NGP6	311 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	OR2A12	Q8NGT7	310 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	PFN4	Q8NHR9	129 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	GRHL3	Q8TE85	626 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	CASTOR1	Q8WTX7	329 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	ZNF559	Q9BR84	538 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	DEC1	Q9P2X7	70 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	ICK	Q9UPZ9	632 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	SPEG	Q15772	3267 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TRAV18	A0A075B6X5	111 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TBC1D3D	A0A087WVF3	549 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TBC1D3I	A0A087WXS9	549 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TBC1D3E	A0A087X179	549 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TBC1D3K	A0A087X1G2	549 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582		A0A1B0GWJ7	208 aa		10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.17	□□□□□ -0.78
PDCD6-210	ENST00000513582	TBC1D3L	B9A6J9	549 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms