RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GRB7Q14451 532 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 HAGHQ16775 308 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 KIF19Q2TAC6 998 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TRMT5Q32P41 509 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC36A2Q495M3 483 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ESCO2Q56NI9 601 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 LPCAT4Q643R3 524 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 LINGO4Q6UY18 593 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 RANBP3LQ86VV4 465 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 MEX3DQ86XN8 651 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 GPSM1Q86YR5 675 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM105Q8N8V8 129 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR7G2Q8NG99 324 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR52E5Q8NH55 327 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 RPLP0P6Q8NHW5 317 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM110BQ8TC76 370 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 LGALS14Q8TCE9 139 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 RNASEH2CQ8TDP1 164 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TM9SF4Q92544 642 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TFGQ92734 400 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 APH1AQ96BI3 265 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SCARF2Q96GP6 870 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PEBP4Q96S96 227 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 FMO2Q99518 471 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ELOVL1Q9BW60 279 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMPRSS13Q9BYE2 586 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM38AQ9H6F2 299 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZDHHC6Q9H6R6 413 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 CXorf36Q9H7Y0 433 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 IL1RL2Q9HB29 575 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 C1orf109Q9NX04 203 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 BABAM2Q9NXR7 383 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SAE1Q9UBE0 346 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 FBLN5Q9UBX5 448 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PSORS1C1Q9UIG5 152 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 KLHL21Q9UJP4 597 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRPF19Q9UMS4 504 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 MOKQ9UQ07 419 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC6A5Q9Y345 797 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 HEMK1Q9Y5R4 338 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 X6R8D5 127 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 A0A1B0GVI7 797 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 A0A1W2PRG6 482 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 FEZF1A0PJY2 475 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 HYKKA2RU49 373 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 E9PLN8 166 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 H3BNH8 94 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRMT5O14744 637 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 CASKO14936 926 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 GSC2O15499 205 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF749O43361 778 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZMPSTE24O75844 475 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 WNT11O96014 354 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM157BP0CG42 384 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 GLB1P16278 677 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 EPHA3P29320 983 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 LIPAP38571 399 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR4D2P58180 307 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 BAMBIQ13145 260 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SRSF6Q13247 344 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 CRMP1Q14194 572 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SYPL1Q16563 259 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 GGTA1PQ4G0N0 100 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SFT2D3Q587I9 215 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR2G6Q5TZ20 316 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 BICRALQ6AI39 1079 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ACSM5Q6NUN0 579 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ADAM5Q6NVV9 412 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PLXDC2Q6UX71 529 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 H2BFWTQ7Z2G1 175 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 CPEB2Q7Z5Q1 589 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMED4Q7Z7H5 227 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 ADGRE4PQ86SQ3 457 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PIM3Q86V86 326 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 IGFN1Q86VF2 1251 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMPRSS12Q86WS5 348 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMEM251Q8N6I4 163 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 HSD17B11Q8NBQ5 300 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 INO80EQ8NBZ0 244 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SEMA6DQ8NFY4 1073 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 PIK3R3Q92569 461 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 R3HDM4Q96D70 268 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 POM121L2Q96KW2 1035 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 IL4I1Q96RQ9 567 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 STACQ99469 402 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 IL12RB2Q99665 862 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 VKORC1Q9BQB6 163 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SNRNP25Q9BV90 132 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 BARHL1Q9BZE3 327 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 KAT8Q9H7Z6 458 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 DNAJC4Q9NNZ3 241 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC2A9Q9NRM0 540 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 RLIMQ9NVW2 624 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 DKKL1Q9UK85 242 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 TP53TG5Q9Y2B4 290 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM96BQ9Y3D0 163 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 CDH10Q9Y6N8 788 aa4.54□□□□□ -1.68
TRAPPC11-208ENST00000511955 SDK1Q7Z5N4 2213 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms