RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 MOB3AQ96BX8 217 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 CCT8L2Q96SF2 557 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 COQ7Q99807 217 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 TRMOQ9BU70 441 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 ZNF160Q9HCG1 818 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 CHRAC1Q9NRG0 131 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 STMN3Q9NZ72 180 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 RCC2Q9P258 522 aaKnown RBP4.37□□□□□ -1.71
NEK1-204ENST00000509912 DLGAP4Q9Y2H0 992 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 GRIP1Q9Y3R0 1128 aa4.37□□□□□ -1.71
NEK1-204ENST00000509912 BOD1L1Q8NFC6 3051 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 EXOC1LA0A1B0GW35 172 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CCL21O00585 134 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CCL22O00626 93 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 NDUFS6O75380 124 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 KLHL2O95198 593 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 AIFM1O95831 613 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SPP1P10451 314 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CD1DP15813 335 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 GCAP28676 217 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SOX6P35712 828 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SLC1A2P43004 574 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 ETV1P50549 477 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 ASCL1P50553 236 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 HSF1Q00613 529 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 TNFAIP8L3Q5GJ75 292 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 OR7E24Q6IFN5 339 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 PAGE2Q7Z2X7 111 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 MRGPRGQ86SM5 289 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 THOC6Q86W42 341 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 SPATA24Q86W54 205 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 RPS19BP1Q86WX3 136 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 METTL4Q8N3J2 472 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CATSPER1Q8NEC5 780 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 ZNF721Q8TF20 911 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 ZNF473Q8WTR7 871 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 PYROXD1Q8WU10 500 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 HGDQ93099 445 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 BTBD9Q96Q07 612 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 ATOH8Q96SQ7 321 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 LMF2Q9BU23 707 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 C9orf16Q9BUW7 83 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SERINC1Q9NRX5 453 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CTSFQ9UBX1 484 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 AURKCQ9UQB9 309 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 GMNCA6NCL1 334 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 RCBTB2O95199 551 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CLPSP04118 112 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CSN3P07498 182 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 APRTP07741 180 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 PRSS56P0CW18 603 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 C21orf33P30042 268 aaPredicted RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 ELK3P41970 407 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SSR4P51571 173 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 ELF3P78545 371 aaPredicted RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 TRAF3Q13114 568 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CES4AQ5XG92 561 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 KLC3Q6P597 504 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 TMEM207Q6UWW9 146 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 MBOAT1Q6ZNC8 495 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SHISA6Q6ZSJ9 500 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CPSF7Q8N684 471 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 CLDN19Q8N6F1 224 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 METTL27Q8N6F8 245 aaPredicted RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 FADS6Q8N9I5 356 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SELENOMQ8WWX9 145 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 PROX1Q92786 737 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 RNASE6Q93091 150 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 ARSGQ96EG1 525 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 MARK4Q96L34 752 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 SAMD8Q96LT4 415 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 NPAS2Q99743 824 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 DHRS9Q9BPW9 319 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 UBQLN3Q9H347 655 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 INTS9Q9NV88 658 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 FAIMQ9NVQ4 179 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 PRODH2Q9UF12 536 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 CES1P1Q9UKY3 287 aa4.36□□□□□ -1.71
NEK1-204ENST00000509912 BOKQ9UMX3 212 aaPredicted RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 RUVBL2Q9Y230 463 aaKnown RBP4.36□□□□□ -1.71
NEK1-204ENST00000509912 ABCA12Q86UK0 2595 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 TMEM120BA0PK00 339 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 FRG2CA6NGY1 282 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 OR6C70A6NIJ9 312 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 SPAG7O75391 227 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 IGHV2-70P01814 119 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 KRT16P08779 473 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 ELK4P28324 431 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 SLC6A6P31641 620 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 GRIA1P42261 906 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 OR1D4P47884 311 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 CYB561P49447 251 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 VSX2P58304 361 aaPredicted RBP4.35□□□□□ -1.71
NEK1-204ENST00000509912 TBPL1P62380 186 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 TNFRSF17Q02223 184 aa4.35□□□□□ -1.71
NEK1-204ENST00000509912 TRAP1Q12931 704 aaKnown RBP4.35□□□□□ -1.71
NEK1-204ENST00000509912 POU6F1Q14863 301 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms