RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CTXN1P60606 82 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 ARF1P84077 181 aaKnown RBP15.93■□□□□ 0.14
NPHP4-210ENST00000506941 TGFBR3Q03167 851 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 TOP3AQ13472 1001 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-210ENST00000506941 PGBD2Q6P3X8 592 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 THSD4Q6ZMP0 1018 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 OR9Q2Q8NGE9 314 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 OR6N1Q8NGY5 312 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 BCL2L2Q92843 193 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF566Q969W8 418 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 TSPAN32Q96QS1 320 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 POLDIP3Q9BY77 421 aaKnown RBP15.93■□□□□ 0.14
NPHP4-210ENST00000506941 MRPL13Q9BYD1 178 aaKnown RBP15.93■□□□□ 0.14
NPHP4-210ENST00000506941 U3KQV3 271 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 PLCE1Q9P212 2302 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 DSCAMO60469 2012 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 TRMUO75648 421 aaKnown RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 SEC14L2O76054 403 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 FPR3P25089 353 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 GSSP48637 474 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 SH3BGRP55822 239 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 PRPS1P60891 318 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 RPL27P61353 136 aaKnown RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 HIST3H3Q16695 136 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 TBRG1Q3YBR2 411 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF770Q6IQ21 691 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 C1orf94Q6P1W5 598 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 LRFN4Q6PJG9 635 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 CDC20BQ86Y33 519 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 C17orf78Q8N4C9 275 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 PAPD5Q8NDF8 572 aaKnown RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 NOXO1Q8NFA2 376 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 NRGNQ92686 78 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 HDAC2Q92769 488 aaKnown RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 MUCL1Q96DR8 90 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 PLPPR2Q96GM1 343 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 KATNB1Q9BVA0 655 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 ULBP2Q9BZM5 246 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 KRCC1Q9NPI7 259 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 CCM2LQ9NUG4 571 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 GLTPQ9NZD2 209 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 IL20RAQ9UHF4 553 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF346Q9UL40 294 aaKnown RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 ADAM18Q9Y3Q7 739 aa15.92■□□□□ 0.14
NPHP4-210ENST00000506941 SAMHD1Q9Y3Z3 626 aaKnown RBP15.92■□□□□ 0.14
NPHP4-210ENST00000506941 A0A096LPE4 126 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 A0A1W2PPZ6 126 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF99A8MXY4 864 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-210ENST00000506941 FKBP6O75344 327 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 CST1P01037 141 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 IGHG1P01857 330 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 ACADSP16219 412 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 IST1P53990 364 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 ERVK-25P63136 954 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 CCNIQ14094 377 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 TAF11Q15544 211 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 BEX5Q5H9J7 111 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 C1orf146Q5VVC0 180 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 FBXW10Q5XX13 1052 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 ANKRD16Q6P6B7 361 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 SYT14Q8NB59 555 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF519Q8TB69 540 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 REEP1Q9H902 201 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 B3GAT2Q9NPZ5 323 aa15.91■□□□□ 0.14
NPHP4-210ENST00000506941 CCNB2O95067 398 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 NDUFB2O95178 105 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 CD14P08571 375 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 RPL4P36578 427 aaKnown RBP15.9■□□□□ 0.14
NPHP4-210ENST00000506941 CLRN1P58418 232 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 TUBA1BP68363 451 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 TUBA4AP68366 448 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 MYBPC1Q00872 1141 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 TUBA1AQ71U36 451 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 FAM122BQ7Z309 247 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 HDDC2Q7Z4H3 204 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 TMEM179BQ7Z7N9 219 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 CLDN22Q8N7P3 220 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 FANK1Q8TC84 345 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 NMD3Q96D46 503 aaKnown RBP15.9■□□□□ 0.14
NPHP4-210ENST00000506941 GPX7Q96SL4 187 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-210ENST00000506941 KCNK17Q96T54 332 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 PLEKHF2Q9H8W4 249 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 AMDHD2Q9Y303 409 aa15.9■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF503-AS2A6NEH8 195 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 DPRXA6NFQ7 191 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 CENPBD1B2RD01 187 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 PLAUP00749 431 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 GASTP01350 101 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 QDPRP09417 244 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 HOXB6P17509 224 aaKnown RBP15.89■□□□□ 0.13
NPHP4-210ENST00000506941 HOXC12P31275 282 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 ACVR1BP36896 505 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 IFNGR2P38484 337 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 FMODQ06828 376 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 BSPH1Q075Z2 132 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 TSPAN31Q12999 210 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 MICAQ29983 383 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 NCMAPQ5T1S8 102 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 SMARCD3Q6STE5 483 aa15.89■□□□□ 0.13
NPHP4-210ENST00000506941 ZNF627Q7L945 461 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms